Pvit_18524 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_18524 T137515_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIVEP2
M10101_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MIBP1_Q6 		0.797 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_18524 C2H2 ZF 184 206
Pvit_18524 C2H2 ZF 212 234
Pvit_18524 C2H2 ZF 1739 1761
Pvit_18524 C2H2 ZF 1767 1791

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPRG_07347 Saprolegnia parasitica SPRG_07347 N 0.000
ALNC14_036870 Albugo laibachii ALNC14_036870 N 0.000
fgenesh_scip_prom.28083.9880 Phytophthora lateralis fgenesh_scip_prom.28083.9880 N 0.000
fgenesh_scip_prom.46568.10844 Phytophthora kernoviae fgenesh_scip_prom.46568.10844 N 0.000
maker-pag1_scaffold_104-snap-gene-0.37 Pythium aphanidermatum maker-pag1_scaffold_104-snap-gene-0.37 N 0.000
maker-par_contig_359-snap-gene-0.8 Pythium arrhenomanes maker-par_contig_359-snap-gene-0.8 N 0.000
maker-pir_contig_315-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_315-fgenesh-gene-0.0 N 0.000
maker-piw_contig_348-snap-gene-0.7 Pythium iwayamai maker-piw_contig_348-snap-gene-0.7 N 0.000
maker-pve_contig_589-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_589-fgenesh-gene-0.0 N 0.000
Phyra74345 Phytophthora ramorum Phyra74345 N 0.000
Phyra84059 Phytophthora ramorum Phyra84059 N 0.000
Physo127312 Phytophthora sojae Physo127312 N 0.000
PITG_01135 Phytophthora infestans PITG_01135 N 0.000
PYU1_G001938 Pythium ultimum PYU1_G001938 N 0.000
e_gw1.3.305.1 Phytophthora capsici e_gw1.3.305.1 N 0.000