cassava9166.m1 (Manihot esculenta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 cassava9166.m1 T137897_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava9166.m1 C2H2 ZF 105 128

Links

Other C2H2 ZF family TFs
Other Manihot esculenta TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G52010 Arabidopsis thaliana AT5G52010 N 0.807
Bra029148 Brassica rapa Bra029148 N 0.759
fgenesh1_pg.C_scaffold_8001227 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001227 N 0.807
GSMUA_Achr8G18570_001 Musa acuminata GSMUA_Achr8G18570_001 N 0.779
POPTR_0014s02520 Populus trichocarpa POPTR_0014s02520 N 0.759
TCM_033790 Theobroma cacao TCM_033790 N 0.768
Cla020960 Citrullus lanatus Cla020960 N 0.759
cassava8973.m1 Manihot esculenta cassava8973.m1 N 0.827
Cucsa.352460 Cucumis sativus Cucsa.352460 N 0.759
Bostr.15774s0347 Boechera stricta Bostr.15774s0347 N 0.807
Gorai.003G099900 Gossypium raimondii Gorai.003G099900 N 0.807
Gorai.010G022000 Gossypium raimondii Gorai.010G022000 N 0.807
Lus10018728.g Linum usitatissimum Lus10018728.g N 0.779
Lus10024807.g Linum usitatissimum Lus10024807.g N 0.779
SapurV1A.0423s0190 Salix purpurea SapurV1A.0423s0190 N 0.759
SapurV1A.2355s0020 Salix purpurea SapurV1A.2355s0020 N 0.759