CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.25.39.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw.25.39.1
T138089_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.25.39.1
C2H2 ZF
3
25
FKCGVCSYSTAVRSNLKVHMLRH
e_gw.25.39.1
C2H2 ZF
30
52
YKCDRCNYAAIRKKQFLAHVKHH
e_gw.25.39.1
C2H2 ZF
58
80
LKCKQCGFSANQLNVLTKHMAVH
e_gw.25.39.1
C2H2 ZF
94
116
FRCRECGFSTAYKHTLTKHMLLH
e_gw.25.39.1
C2H2 ZF
122
144
YKCEQCSYATIRQAHLRVHMKCH
e_gw.25.39.1
C2H2 ZF
150
172
LKCRQCGFSTRRRIILDRHIAGH
e_gw.25.39.1
C2H2 ZF
203
225
FKCKECSYSSPHKQTLKRHTLTH
e_gw.25.39.1
C2H2 ZF
231
253
HKCDQCSYATIRKSNLLIHMKCH
e_gw.25.39.1
C2H2 ZF
308
330
FQCKECGYSTAYKGDLKRHQLRH
e_gw.25.39.1
C2H2 ZF
336
358
YKCDKCPYAAIEKLTLLRHIERH
e_gw.25.39.1
C2H2 ZF
396
418
FQCKECSYSTAYKADLKRHQLRH
e_gw.25.39.1
C2H2 ZF
424
446
YKCDQCSYAAIEKLNLRRHMKRH
e_gw.25.39.1
C2H2 ZF
452
474
LKCVQCGFSTKRKGVLTRHMAVH
e_gw.25.39.1
C2H2 ZF
482
502
SVNCGYATDLTSDLKRHIVRH
e_gw.25.39.1
C2H2 ZF
536
558
LKCQQCGFSTKHKGVLTRHMAVH
e_gw.25.39.1
C2H2 ZF
600
622
YLCGQCSFATSERSKWEMHMFKH
e_gw.25.39.1
C2H2 ZF
628
651
FACEECDFKTNYEFTLSAHIQKVH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_1580055
Branchiostoma floridae
estExt_fgenesh2_pg.C_1580055
N
0.780