e_gw.6.95.1 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 e_gw.6.95.1 T138379_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.766 0.847
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.766 0.847
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.766 0.847
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.6.95.1 C2H2 ZF 1 21
e_gw.6.95.1 C2H2 ZF 31 52
e_gw.6.95.1 C2H2 ZF 56 78
e_gw.6.95.1 C2H2 ZF 84 106
e_gw.6.95.1 C2H2 ZF 112 133

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF184 Homo sapiens ENSG00000096654 D
ENSNLEG00000004444 Nomascus leucogenys ENSNLEG00000004444 I
Myotis_brandtii_ZNF184_10002326 Myotis brandtii Myotis_brandtii_ZNF184_10002326 I
ENSP00000366636 Macaca fascicularis ENSP00000366636 I
ZNF184 Tursiops truncatus ENSTTRG00000009547 I
ENSSSCG00000024278 Sus scrofa ENSSSCG00000024278 I
ZNF184 Sus scrofa ENSSSCG00000001164 I
ENSSARG00000002778 Sorex araneus ENSSARG00000002778 I
Zfp184 Rattus norvegicus ENSRNOG00000061612 I
ENSPVAG00000015425 Pteropus vampyrus ENSPVAG00000015425 I
ZNF184 Pan troglodytes ENSPTRG00000017847 I
ENSPPYG00000016345 Pongo abelii ENSPPYG00000016345 I
ENSPANG00000024972 Papio anubis ENSPANG00000024972 I
ENSOPRG00000017310 Ochotona princeps ENSOPRG00000017310 I
ENSOGAG00000004175 Otolemur garnettii ENSOGAG00000004175 I
ENSOCUG00000029718 Oryctolagus cuniculus ENSOCUG00000029718 I
ENSOARG00000018426 Ovis aries ENSOARG00000018426 I
ENSAMEG00000008045 Ailuropoda melanoleuca ENSAMEG00000008045 I
Zfp184 Mus musculus ENSMUSG00000006720 I
ENSMMUG00000008060 Macaca mulatta ENSMMUG00000008060 I
ENSMLUG00000015830 Myotis lucifugus ENSMLUG00000015830 I
ZNF184 Loxodonta africana ENSLAFG00000015545 I
ZNF184 Gorilla gorilla ENSGGOG00000004180 I
ZNF184 Erinaceus europaeus ENSEEUG00000000968 I
ENSDORG00000000770 Dipodomys ordii ENSDORG00000000770 I
ENSDNOG00000018392 Dasypus novemcinctus ENSDNOG00000018392 I
ENSCSAG00000007954 Chlorocebus sabaeus ENSCSAG00000007954 I
ENSCJAG00000011235 Callithrix jacchus ENSCJAG00000011235 I
ZNF184 Choloepus hoffmanni ENSCHOG00000001902 I
ENSCAFG00000011235 Canis familiaris ENSCAFG00000011235 I
ENSBTAG00000011498 Bos taurus ENSBTAG00000011498 I