CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_1280075
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_1280075
T138598_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1280075
C2H2 ZF
619
641
FTCTKCSAPFQSRKDLKIHSKIH
estExt_fgenesh2_pg.C_1280075
C2H2 ZF
647
670
HDCKVCGAKFRQGGSRDRHLRKIH
estExt_fgenesh2_pg.C_1280075
C2H2 ZF
700
722
TSCYLCGKPVADIDEYKIHMKEH
estExt_fgenesh2_pg.C_1280075
C2H2 ZF
734
756
YQCLVCQARYRDVKTIQLHMRNH
estExt_fgenesh2_pg.C_1280075
C2H2 ZF
1320
1342
FYCNICGARYSEEATLRMHMRLH
estExt_fgenesh2_pg.C_1280075
C2H2 ZF
1360
1382
FVCAVCGGRFDEKDELVRHSRIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MBR_10439
Metarhizium brunneum
MBR_10439
N
X797_008650
Metarhizium robertsii
X797_008650
N