estExt_fgenesh2_pg.C_5760011 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh2_pg.C_5760011 T138735_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF11
M00242_2.00 		Homo sapiens
MCGCCCCC
GGGGGCGK		 PBM
Barrera et al.(2016)
KLF11_REF 		0.780 0.855
KLF11
M04554_2.00 		Homo sapiens
VMCMCRCCCMYNMCACGCCCMC
GKGGGCGTGKNRKGGGYGKGKB		 SELEX
Yin et al.(2017)
KLF11_eDBD_HT-SELEX 		0.780 0.855
KLF11
M10261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FKLF_Q5 		0.780 0.855
KLF11
M00241_2.00 		Homo sapiens
MCGCCCMC
GKGGGCGK		 PBM
Barrera et al.(2016)
KLF11_R402Q 		0.780 0.855
KLF11
M04555_2.00 		Homo sapiens
VMCMCRCCCHYNHCACGCCCMC
GKGGGCGTGDNRDGGGYGKGKB		 SELEX
Yin et al.(2017)
KLF11_eDBD_Methyl-HT-SELEX 		0.780 0.855
KLF10
M04489_2.00 		Homo sapiens
RMCACRCCCMYVHCACRCCCMC
GKGGGYGTGDBRKGGGYGTGKY		 SELEX
Yin et al.(2017)
KLF10_eDBD_HT-SELEX 		0.768 0.855
KLF10
M08246_2.00 		Homo sapiens
RCCMCRCCCH
DGGGYGKGGY		 ChIP-seq
Najafabadi et al.(2015b)
KLF10 		0.768 0.855
KLF10
M08317_2.00 		Homo sapiens
SMCMCRCCCMYNBSN
NSVNRKGGGYGKGKS		 ChIP-seq
Schmitges et al.(2016)
Q13118.MEME 		0.768 0.855
KLF10
M10228_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TIEG1_Q6 		0.768 0.855
KLF10
M04490_2.00 		Homo sapiens
RMCACRCCCMYGMCACRCCCHC
GDGGGYGTGKCRKGGGYGTGKY		 SELEX
Yin et al.(2017)
KLF10_eDBD_Methyl-HT-SELEX 		0.768 0.855
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_5760011 C2H2 ZF 391 415
estExt_fgenesh2_pg.C_5760011 C2H2 ZF 421 445
estExt_fgenesh2_pg.C_5760011 C2H2 ZF 451 473

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU07379 Neurospora crassa NCU07379 D
SNOG_04391 Stagonospora nodorum SNOG_04391 I
VDBG_06054 Verticillium albo atrum VDBG_06054 I
A1O1_05447 Capronia coronata A1O1_05447 I
ACRE_034210 Acremonium chrysogenum ACRE_034210 I
ARB_03643 Arthroderma benhamiae ARB_03643 I
AUEXF2481DRAFT_5486 Aureobasidium subglaciale AUEXF2481DRAFT_5486 I
BAUCODRAFT_249790 Baudoinia compniacensis BAUCODRAFT_249790 I
BBA_06988 Beauveria bassiana BBA_06988 I
Bcin15g00200 Botrytis cinerea Bcin15g00200 I
CADAORAG00008810 Aspergillus oryzae CADAORAG00008810 I
CCM_01128 Cordyceps militaris CCM_01128 I
CFIO01_11126 Colletotrichum fioriniae CFIO01_11126 I
CGGC5_2437 Colletotrichum gloeosporioides CGGC5_2437 I
CH063_05360 Colletotrichum higginsianum CH063_05360 I
CMQ_566 Grosmannia clavigera CMQ_566 I
Cob_01611 Colletotrichum orbiculare Cob_01611 I
COCC4DRAFT_163657 Bipolaris maydis COCC4DRAFT_163657 I
COCCADRAFT_112191 Bipolaris zeicola COCCADRAFT_112191 I
COCMIDRAFT_80851 Bipolaris oryzae COCMIDRAFT_80851 I
COCSADRAFT_93076 Bipolaris sorokiniana COCSADRAFT_93076 I
COCVIDRAFT_31288 Bipolaris victoriae COCVIDRAFT_31288 I
CPUR_01747 Claviceps purpurea CPUR_01747 I
CSUB01_01401 Colletotrichum sublineola CSUB01_01401 I
CTHT_0003600 Chaetomium thermophilum CTHT_0003600 I
DOTSEDRAFT_164596 Dothistroma septosporum DOTSEDRAFT_164596 I
EURHEDRAFT_518989 Aspergillus ruber EURHEDRAFT_518989 I
EV44_g2223 Erysiphe necator EV44_g2223 I
F503_06775 Ophiostoma piceae uamh F503_06775 I
FFUJ_01507 Fusarium fujikuroi FFUJ_01507 I
FGRRES_01313 Fusarium graminearum FGRRES_01313 I
FOXG_00073 Fusarium oxysporum FOXG_00073 I
FPSE_03349 Fusarium pseudograminearum FPSE_03349 I
FVEG_01443 Fusarium verticillioides FVEG_01443 I
G647_03181 Cladophialophora carrionii G647_03181 I
GGTG_01216 Gaeumannomyces graminis GGTG_01216 I
GLRG_03942 Colletotrichum graminicola GLRG_03942 I
GMDG_08213 Pseudogymnoascus destructans GMDG_08213 I
GSTUM_00001612001 Tuber melanosporum GSTUM_00001612001 I
H101_02270 Trichophyton interdigitale H101_02270 I
H102_06775 Trichophyton rubrum H102_06775 I
H105_06815 Trichophyton soudanense H105_06815 I
HMPREF1624_07695 Sporothrix schenckii HMPREF1624_07695 I
LEMA_P026860.1 Leptosphaeria maculans LEMA_P026860.1 I
M437DRAFT_76008 Aureobasidium melanogenum M437DRAFT_76008 I
M438DRAFT_282148 Aureobasidium pullulans M438DRAFT_282148 I
MAC_07148 Metarhizium acridum MAC_07148 I
MAJ_04559 Metarhizium majus MAJ_04559 I
MAM_03661 Metarhizium album MAM_03661 I
MANI_013653 Metarhizium anisopliae MANI_013653 I
MAPG_08236 Magnaporthe poae MAPG_08236 I
MBM_00160 Marssonina brunnea MBM_00160 I
MBR_06029 Metarhizium brunneum MBR_06029 I
MGG_00342 Magnaporthe oryzae MGG_00342 I
MGU_06448 Metarhizium guizhouense MGU_06448 I
MPH_10926 Macrophomina phaseolina MPH_10926 I
MYCFIDRAFT_86007 Pseudocercospora fijiensis MYCFIDRAFT_86007 I
Mycgr3G66896 Zymoseptoria tritici Mycgr3G66896 I
MYCTH_2297066 Myceliophthora thermophila MYCTH_2297066 I
NEUTE1DRAFT_105272 Neurospora tetrasperma NEUTE1DRAFT_105272 I
OCS_06036 Ophiocordyceps sinensis OCS_06036 I
OIDMADRAFT_202703 Oidiodendron maius OIDMADRAFT_202703 I
PCH_Pc12g01640 Penicillium rubens PCH_Pc12g01640 I
PDIP_02990 Penicillium digitatum PDIP_02990 I
PEX1_081340 Penicillium expansum PEX1_081340 I
PFICI_01432 Pestalotiopsis fici PFICI_01432 I
PITC_020790 Penicillium italicum PITC_020790 I
PMAA_100250 Talaromyces marneffei PMAA_100250 I
PODANS_1_17900 Podospora anserina PODANS_1_17900 I
PTRG_07994 Pyrenophora triticirepentis PTRG_07994 I
PTT_09501 Pyrenophora teres PTT_09501 I
PV09_01645 Verruconis gallopava PV09_01645 I
PV10_03189 Exophiala mesophila PV10_03189 I
S40285_05984 Stachybotrys chlorohalonata S40285_05984 I
S40288_06814 Stachybotrys chartarum S40288_06814 I
SBOR_9585 Sclerotinia borealis SBOR_9585 I
SEPMUDRAFT_103885 Sphaerulina musiva SEPMUDRAFT_103885 I
SETTUDRAFT_169120 Setosphaeria turcica SETTUDRAFT_169120 I
SMAC_00328 Sordaria macrospora SMAC_00328 I
SPBR_07829 Sporothrix brasiliensis SPBR_07829 I
TEQG_00005 Trichophyton equinum TEQG_00005 I
TESG_03658 Trichophyton tonsurans TESG_03658 I
THITE_2112534 Thielavia terrestris THITE_2112534 I
TRIATDRAFT_301441 Trichoderma atroviride TRIATDRAFT_301441 I
TRIVIDRAFT_227332 Trichoderma virens TRIVIDRAFT_227332 I
TRV_01964 Trichophyton verrucosum TRV_01964 I
U727_00431281371 Penicillium solitum U727_00431281371 I
UCREL1_941 Eutypa lata UCREL1_941 I
UCRPA7_4041 Togninia minima UCRPA7_4041 I
VDAG_03214 Verticillium dahliae VDAG_03214 I
VDBG_06054 Verticillium alfalfae VDBG_06054 I
VHEMI02403 Torrubiella hemipterigena VHEMI02403 I
W97_01199 Coniosporium apollinis W97_01199 I
X797_005785 Metarhizium robertsii X797_005785 I
Z517_02456 Fonsecaea pedrosoi Z517_02456 I
estExt_fgenesh1_pg.C_10877 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_10877 I
estExt_fgenesh3_kg.C_40226 Neurospora discreta estExt_fgenesh3_kg.C_40226 I
estExt_Genewise1.C_30429 Cochliobolus heterostrophus C5 estExt_Genewise1.C_30429 I
estExt_Genewise1Plus.C_chr_12913 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_12913 I
AB03286.1 Alternaria brassicicola AB03286.1 I
Pc12g01640 Penicillium chrysogenum Pc12g01640 I
PMAA_100250 Penicillium marneffei PMAA_100250 I