CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_160187
(
Mycosphaerella fijiensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_Genewise1.C_160187
T138842_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06503
M01888_2.00
Neurospora crassa
NNCCCCDCNN
NNGHGGGGNN
PBM
Weirauch et al.(2014)
pTH8898
0.822
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_160187
C2H2 ZF
32
54
YKCQFCNRAFSRSEHRSRHERSH
estExt_Genewise1.C_160187
C2H2 ZF
60
83
FKCQKCRSTFVRRDLLLRHDRTVH
Links
Other
C2H2 ZF
family TFs
Other
Mycosphaerella fijiensis
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MAC_00186
Metarhizium acridum
MAC_00186
N