CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_11000107
(
Phanerochaete chrysosporium
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh1_pg.C_scaffold_11000107
T138979_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_11000107
C2H2 ZF
276
298
YQCPTCPRAFARAFNLKTHIQTH
fgenesh1_pg.C_scaffold_11000107
C2H2 ZF
306
331
YACHHKTCGRSFSRKHDLTRHLVSIH
Links
Other
C2H2 ZF
family TFs
Other
Phanerochaete chrysosporium
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_019690
Aspergillus clavatus
CADACLAG00002703
N
CADAFLAG00001162
Aspergillus flavus
CADAFLAG00001162
N
AFUA_1G15680
Aspergillus fumigatus
CADAFUAG00007561
N
CADANGAG00001400
Aspergillus niger
CADANGAG00001400
N
CADAORAG00003051
Aspergillus oryzae
CADAORAG00003051
N
ATEG_05228
Aspergillus terreus
CADATEAG00005360
N
NFIA_009650
Neosartorya fischeri
CADNFIAG00001396
N
EPUS_03085
Endocarpon pusillum
EPUS_03085
N
EURHEDRAFT_470269
Aspergillus ruber
EURHEDRAFT_470269
N
PCH_Pc06g01850
Penicillium rubens
PCH_Pc06g01850
N
PDE_00486
Penicillium oxalicum
PDE_00486
N
PITC_048780
Penicillium italicum
PITC_048780
N
fgenesh1_pg.00042_#_336
Aspergillus carbonarius
fgenesh1_pg.00042_#_336
N
Pc06g01850
Penicillium chrysogenum
Pc06g01850
N