fgenesh2_pm.scaffold_50000003 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 fgenesh2_pm.scaffold_50000003 T139833_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pm.scaffold_50000003 C2H2 ZF 10 32
fgenesh2_pm.scaffold_50000003 C2H2 ZF 38 60
fgenesh2_pm.scaffold_50000003 C2H2 ZF 66 89
fgenesh2_pm.scaffold_50000003 C2H2 ZF 95 117
fgenesh2_pm.scaffold_50000003 C2H2 ZF 151 173
fgenesh2_pm.scaffold_50000003 C2H2 ZF 179 201
fgenesh2_pm.scaffold_50000003 C2H2 ZF 207 229
fgenesh2_pm.scaffold_50000003 C2H2 ZF 235 257
fgenesh2_pm.scaffold_50000003 C2H2 ZF 261 283
fgenesh2_pm.scaffold_50000003 C2H2 ZF 302 324
fgenesh2_pm.scaffold_50000003 C2H2 ZF 330 352
fgenesh2_pm.scaffold_50000003 C2H2 ZF 358 380
fgenesh2_pm.scaffold_50000003 C2H2 ZF 386 408
fgenesh2_pm.scaffold_50000003 C2H2 ZF 412 434

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NCU05285 Neurospora crassa NCU05285 D
PV07_04386 Cladophialophora immunda PV07_04386 I
Z519_07822 Cladophialophora bantiana Z519_07822 I
Z518_08321 Rhinocladiella mackenziei Z518_08321 I
Z517_04076 Fonsecaea pedrosoi Z517_04076 I
TESG_08227 Trichophyton tonsurans TESG_08227 I
TESG_05885 Trichophyton tonsurans TESG_05885 I
PV11_00550 Exophiala sideris PV11_00550 I
PV10_07034 Exophiala mesophila PV10_07034 I
PV09_03275 Verruconis gallopava PV09_03275 I
PV08_00413 Exophiala spinifera PV08_00413 I
A1O1_03662 Capronia coronata A1O1_03662 I
PV06_01114 Exophiala oligosperma PV06_01114 I
PV05_04442 Exophiala xenobiotica PV05_04442 I
MGU_11750 Metarhizium guizhouense MGU_11750 I
MGU_10998 Metarhizium guizhouense MGU_10998 I
MAJ_07934 Metarhizium majus MAJ_07934 I
HMPREF1541_01683 Cyphellophora europaea HMPREF1541_01683 I
HMPREF1120_01206 Exophiala dermatitidis HMPREF1120_01206 I
A1O9_04665 Exophiala aquamarina A1O9_04665 I
A1O5_07986 Cladophialophora psammophila A1O5_07986 I
A1O3_07301 Capronia epimyces A1O3_07301 I