CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshPB_pg.20__150
(
Phycomyces blakesleeanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgeneshPB_pg.20__150
T139957_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshPB_pg.20__150
C2H2 ZF
16
41
FQCSGYGSCSMTFSRSEHLARHTRKH
fgeneshPB_pg.20__150
C2H2 ZF
47
71
FKCVVPECTRKFSRFDNMMQHTQTH
Links
Other
C2H2 ZF
family TFs
Other
Phycomyces blakesleeanus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HPODL_03573
Ogataea parapolymorpha
HPODL_03573
I
0.756
PNEG_03244
Pneumocystis murina
PNEG_03244
I
0.761
RO3G_00960
Rhizopus oryzae
RO3G_00960
N
0.765
RO3G_01370
Rhizopus oryzae
RO3G_01370
N
0.786
RO3G_04856
Rhizopus oryzae
RO3G_04856
N
0.785
RO3G_12434
Rhizopus oryzae
RO3G_12434
N
0.776
RO3G_13206
Rhizopus oryzae
RO3G_13206
N
0.781
estExt_fgeneshMC_kg.C_20262
Mucor circinelloides
estExt_fgeneshMC_kg.C_20262
N
0.786
estExt_fgeneshMC_kg.C_50047
Mucor circinelloides
estExt_fgeneshMC_kg.C_50047
N
0.791
estExt_Genewise1Plus.C_110080
Mucor circinelloides
estExt_Genewise1Plus.C_110080
N
0.757
fgeneshMC_pg.5_#_815
Mucor circinelloides
fgeneshMC_pg.5_#_815
N
0.786