CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ocbimv22005768m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22005768m.g
T140518_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22005768m.p
C2H2 ZF
1
19
ICDKSFTQRSNLTKHNVIH
Ocbimv22005768m.p
C2H2 ZF
25
47
YRCNNCGKLFSSNANLIIHKRVH
Ocbimv22005768m.p
C2H2 ZF
53
75
YHCDVCDKSFAQATDLTKHKRIH
Ocbimv22005768m.p
C2H2 ZF
81
92
YQCNICGICFSA
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MBD7
Arabidopsis thaliana
AT5G59800
N
Bostr.26833s0257
Boechera stricta
Bostr.26833s0257
N