CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22014607m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22014607m.g
T140946_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22014607m.p
C2H2 ZF
164
185
YQCERCGKVFAYRYYRDKHLKY
Ocbimv22014607m.p
C2H2 ZF
196
219
FPCHLCTRSFEKRDRLRIHVLHVH
Ocbimv22014607m.p
C2H2 ZF
225
247
HKCSVCGKSFSQSSSLNKHMRVH
Ocbimv22014607m.p
C2H2 ZF
253
275
YKCVYCSKAFTASSILRTHIRQH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pc12g09830
Penicillium chrysogenum
Pc12g09830
I
PCH_Pc12g09830
Penicillium rubens
PCH_Pc12g09830
I
PDE_08922
Penicillium oxalicum
PDE_08922
I
PDIP_36970
Penicillium digitatum
PDIP_36970
I
PEX1_101600
Penicillium expansum
PEX1_101600
I
PITC_095480
Penicillium italicum
PITC_095480
I
U727_00433560331
Penicillium solitum
U727_00433560331
I
PV06_04219
Exophiala oligosperma
PV06_04219
N
Z519_10183
Cladophialophora bantiana
Z519_10183
N
Z517_12001
Fonsecaea pedrosoi
Z517_12001
N
TRIVIDRAFT_154783
Trichoderma virens
TRIVIDRAFT_154783
N
TRIATDRAFT_226133
Trichoderma atroviride
TRIATDRAFT_226133
N
PV08_10740
Exophiala spinifera
PV08_10740
N
PV07_07738
Cladophialophora immunda
PV07_07738
N
A1O5_03360
Cladophialophora psammophila
A1O5_03360
N
PV04_05095
Capronia semiimmersa
PV04_05095
N
G647_04532
Cladophialophora carrionii
G647_04532
N
A1O7_04159
Cladophialophora yegresii
A1O7_04159
N