Sakowv30019519m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30019519m.g T142313_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
23943244_peptide C2H2 ZF 155 179
23943244_peptide C2H2 ZF 183 206
23943244_peptide C2H2 ZF 218 240
23943244_peptide C2H2 ZF 246 269
23943244_peptide C2H2 ZF 304 325

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPRG_15862 Saprolegnia parasitica SPRG_15862 N
ALNC14_142750 Albugo laibachii ALNC14_142750 N
F443_05152 Phytophthora parasitica F443_05152 N
fgenesh_scip_prom.28083.4657 Phytophthora lateralis fgenesh_scip_prom.28083.4657 N
fgenesh_scip_prom.46568.9178 Phytophthora kernoviae fgenesh_scip_prom.46568.9178 N
HpaG812689 Hyaloperonospora arabidopsidis HpaG812689 N
maker-pag1_scaffold_149-fgenesh-gene-0.12 Pythium aphanidermatum maker-pag1_scaffold_149-fgenesh-gene-0.12 N
maker-pir_contig_546-fgenesh-gene-0.1 Pythium irregulare maker-pir_contig_546-fgenesh-gene-0.1 N
maker-piw_contig_12-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_12-fgenesh-gene-0.1 N
maker-pve_contig_133-fgenesh-gene-0.7 Pythium vexans maker-pve_contig_133-fgenesh-gene-0.7 N
Phyra76743 Phytophthora ramorum Phyra76743 N
Physo130359 Phytophthora sojae Physo130359 N
PITG_13845 Phytophthora infestans PITG_13845 N
PYU1_G006167 Pythium ultimum PYU1_G006167 N
estExt_fgenesh1_kg.C_30538 Phytophthora capsici estExt_fgenesh1_kg.C_30538 N