Carubv10003820m.g (Capsella rubella)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Carubv10003820m.g T142700_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP5
M01851_2.00 		Arabidopsis thaliana
DSWTNNNN
NNNNAWSH		 PBM
Weirauch et al.(2014)
pTH7539 		0.764 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10003820m C2H2 ZF 57 79

Links

Other C2H2 ZF family TFs
Other Capsella rubella TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
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CLEC002030 Cimex lectularius CLEC002030 I
HHAL010124-PA Halyomorpha halys HHAL010124-PA I
AALB007471 Anopheles albimanus AALB007471 I
AARA006017 Anopheles arabiensis AARA006017 I
AATE013052 Anopheles atroparvus AATE013052 I
ACHR008511 Anopheles christyi ACHR008511 I
ACOM038426 Anopheles coluzzii ACOM038426 I
ACUA025859 Anopheles culicifacies ACUA025859 I
ADIR009163 Anopheles dirus ADIR009163 I
PHUM427690 Pediculus humanus PHUM427690 I
AFAF004411 Anopheles farauti AFAF004411 I
AFUN010977 Anopheles funestus AFUN010977 I
AMAM010137 Anopheles maculatus AMAM010137 I
AMEC003483 Anopheles melas AMEC003483 I
AMEM009002 Anopheles merus AMEM009002 I
AMIN008106 Anopheles minimus AMIN008106 I
ASIS023046 Anopheles sinensis ASIS023046 I
ASTEI08109 Anopheles stephensi ASTEI08109 I
GI18841 Drosophila mojavensis FBgn0141580 I
AAEL002474 Aedes aegypti AAEL002474 I
ADAC005598 Anopheles darlingi ADAC005598 I
AGAP004767 Anopheles gambiae AGAP004767 I
CPIJ016082 Culex quinquefasciatus CPIJ016082 I
ken Drosophila yakuba FBgn0067962 I
ken Drosophila pseudoobscura FBgn0078979 I
GF12868 Drosophila ananassae FBgn0089902 I
GG22895 Drosophila erecta FBgn0115052 I
GH21687 Drosophila grimshawi FBgn0129148 I
Hsal_07497--XP_623760.2_APIME Harpegnathos saltator Hsal_07497--XP_623760.2_APIME I
GL11171 Drosophila persimilis FBgn0148781 I
GM16054 Drosophila sechellia FBgn0170970 I
GJ21870 Drosophila virilis FBgn0208987 I
GK15862 Drosophila willistoni FBgn0217865 I
GB50874 Apis mellifera GB50874 I
L798_12553 Zootermopsis nevadensis L798_12553 I
MESCA008027 Megaselia scalaris MESCA008027 I
CpipJ_CPIJ016082 Culex pipiens CpipJ_CPIJ016082 I