CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genemark1.C_70364
(
Coccomyxa subellipsoidea C169
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_Genemark1.C_70364
T142805_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
66058
C2H2 ZF
236
259
SCEVCDISATSPDLLVQHLQGRKH
66058
C2H2 ZF
278
302
YPCDVCKVVTSSEEQLAVHMDGKRH
66058
C2H2 ZF
747
771
HECVVCGITTTSAAHLEAHMRGRKH
66058
C2H2 ZF
788
812
HYCKICDITTTSAQHMAMHVAGKAH
Links
Other
C2H2 ZF
family TFs
Other
Coccomyxa subellipsoidea C169
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshCV_pg.C_70086
Chlorella vulgaris
estExt_fgeneshCV_pg.C_70086
N
0.827