orange1.1g026846m.g (Citrus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 orange1.1g026846m.g T143272_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g026846m C2H2 ZF 5 19
orange1.1g026846m C2H2 ZF 25 50
orange1.1g026846m C2H2 ZF 88 113
orange1.1g027872m C2H2 ZF 10 35
orange1.1g027872m C2H2 ZF 73 98

Links

Other C2H2 ZF family TFs
Other Citrus sinensis TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WRKY40 Arabidopsis thaliana AT1G80840 D
WRKY60 Arabidopsis thaliana AT2G25000 D
WRKY18 Arabidopsis thaliana AT4G31800 D
AC209050.3_FG003 Zea mays AC209050.3_FG003 I
AMTR_s00065p00201230 Amborella trichopoda AMTR_s00065p00201230 I
AMTR_s00065p00201830 Amborella trichopoda AMTR_s00065p00201830 I
WRKY71 Oryza indica BGIOSGA007670 I
BGIOSGA017481 Oryza indica BGIOSGA017481 I
BGIOSGA020778 Oryza indica BGIOSGA020778 I
WRKY62 Oryza indica BGIOSGA029757 I
WRKY76 Oryza indica BGIOSGA029758 I
Bo1g010960 Brassica oleracea Bo1g010960 I
Bo2g095640 Brassica oleracea Bo2g095640 I
Bo3g173640 Brassica oleracea Bo3g173640 I
Bo6g080740 Brassica oleracea Bo6g080740 I
Bo6g124190 Brassica oleracea Bo6g124190 I
Bo7g115410 Brassica oleracea Bo7g115410 I
Bra003588 Brassica rapa Bra003588 I
Bra008435 Brassica rapa Bra008435 I
Bra010220 Brassica rapa Bra010220 I
Bra011299 Brassica rapa Bra011299 I
Bra019123 Brassica rapa Bra019123 I
Bra023983 Brassica rapa Bra023983 I
Bra035148 Brassica rapa Bra035148 I
BRADI1G30870 Brachypodium distachyon BRADI1G30870 I
BRADI3G06070 Brachypodium distachyon BRADI3G06070 I
BRADI4G30360 Brachypodium distachyon BRADI4G30360 I
F775_13004 Aegilops tauschii F775_13004 I
F775_15894 Aegilops tauschii F775_15894 I
F775_19044 Aegilops tauschii F775_19044 I
F775_19657 Aegilops tauschii F775_19657 I
F775_22247 Aegilops tauschii F775_22247 I
fgenesh1_pm.C_scaffold_7000774 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000774 I
WRKY40 Arabidopsis lyrata fgenesh2_kg.2__2291__AT1G80840.1 I
WRKY60 Arabidopsis lyrata fgenesh2_kg.4__412__AT2G25000.1 I
GLYMA04G06495 Glycine max GLYMA04G06495 I
GLYMA04G34220 Glycine max GLYMA04G34220 I
GLYMA06G06530 Glycine max GLYMA06G06530 I
GLYMA07G02630 Glycine max GLYMA07G02630 I
GLYMA08G23380 Glycine max GLYMA08G23380 I
GLYMA13G44730 Glycine max GLYMA13G44730 I
GLYMA14G11920 Glycine max GLYMA14G11920 I
GLYMA14G11960 Glycine max GLYMA14G11960 I
GLYMA15G00570 Glycine max GLYMA15G00570 I
GLYMA17G33891 Glycine max GLYMA17G33891 I
GLYMA17G33920 Glycine max GLYMA17G33920 I
GRMZM2G057011 Zea mays GRMZM2G057011 I
GRMZM2G111711 Zea mays GRMZM2G111711 I
GRMZM2G120320 Zea mays GRMZM2G120320 I
GRMZM2G125653 Zea mays GRMZM2G125653 I
GRMZM2G169149 Zea mays GRMZM2G169149 I
GSMUA_Achr10G06050_001 Musa acuminata GSMUA_Achr10G06050_001 I
GSMUA_Achr10G24080_001 Musa acuminata GSMUA_Achr10G24080_001 I
GSMUA_Achr11G08290_001 Musa acuminata GSMUA_Achr11G08290_001 I
GSMUA_Achr1G10080_001 Musa acuminata GSMUA_Achr1G10080_001 I
GSMUA_Achr2G05100_001 Musa acuminata GSMUA_Achr2G05100_001 I
GSMUA_Achr3G13440_001 Musa acuminata GSMUA_Achr3G13440_001 I
GSMUA_Achr4G01930_001 Musa acuminata GSMUA_Achr4G01930_001 I
GSMUA_Achr5G16460_001 Musa acuminata GSMUA_Achr5G16460_001 I
GSMUA_Achr7G05200_001 Musa acuminata GSMUA_Achr7G05200_001 I
GSMUA_Achr7G16090_001 Musa acuminata GSMUA_Achr7G16090_001 I
GSMUA_Achr7G19340_001 Musa acuminata GSMUA_Achr7G19340_001 I
LPERR02G05420 Leersia perrieri LPERR02G05420 I
LPERR05G22790 Leersia perrieri LPERR05G22790 I
LPERR06G18970 Leersia perrieri LPERR06G18970 I
LPERR09G07230 Leersia perrieri LPERR09G07230 I
LPERR09G07240 Leersia perrieri LPERR09G07240 I
MLOC_4945 Hordeum vulgare MLOC_4945 I
MLOC_60890 Hordeum vulgare MLOC_60890 I
MLOC_70190 Hordeum vulgare MLOC_70190 I
MTR_1g013760 Medicago truncatula MTR_1g013760 I
MTR_1g013790 Medicago truncatula MTR_1g013790 I
MTR_2g105060 Medicago truncatula MTR_2g105060 I
MTR_3g106060 Medicago truncatula MTR_3g106060 I
MTR_4g007060 Medicago truncatula MTR_4g007060 I
OB02G15470 Oryza brachyantha OB02G15470 I
OB05G34770 Oryza brachyantha OB05G34770 I
OB06G30540 Oryza brachyantha OB06G30540 I
OB09G16960 Oryza brachyantha OB09G16960 I
OB09G16970 Oryza brachyantha OB09G16970 I
OB10G12550 Oryza brachyantha OB10G12550 I
OBART02G06150 Oryza barthii OBART02G06150 I
OBART05G27250 Oryza barthii OBART05G27250 I
OBART09G10380 Oryza barthii OBART09G10380 I
OBART09G10390 Oryza barthii OBART09G10390 I
OGLUM02G06150 Oryza glumaepatula OGLUM02G06150 I
OGLUM05G28780 Oryza glumaepatula OGLUM05G28780 I
OGLUM06G24120 Oryza glumaepatula OGLUM06G24120 I
OGLUM09G10770 Oryza glumaepatula OGLUM09G10770 I
OGLUM09G10780 Oryza glumaepatula OGLUM09G10780 I
OLONG_001234 Oryza longistaminata OLONG_001234 I
OLONG_007261 Oryza longistaminata OLONG_007261 I
OLONG_008502 Oryza longistaminata OLONG_008502 I
OMERI02G07060 Oryza meridionalis OMERI02G07060 I
OMERI05G23200 Oryza meridionalis OMERI05G23200 I
OMERI06G22830 Oryza meridionalis OMERI06G22830 I
OMERI09G08210 Oryza meridionalis OMERI09G08210 I
OMERI09G08220 Oryza meridionalis OMERI09G08220 I
ONIVA02G07170 Oryza nivara ONIVA02G07170 I
ONIVA06G27040 Oryza nivara ONIVA06G27040 I
ONIVA09G10030 Oryza nivara ONIVA09G10030 I
ONIVA09G10050 Oryza nivara ONIVA09G10050 I
ONIVA12G14120 Oryza nivara ONIVA12G14120 I
OPUNC02G05410 Oryza punctata OPUNC02G05410 I
OPUNC02G05430 Oryza punctata OPUNC02G05430 I
OPUNC05G24790 Oryza punctata OPUNC05G24790 I
OPUNC06G20620 Oryza punctata OPUNC06G20620 I
OPUNC09G08970 Oryza punctata OPUNC09G08970 I
OPUNC09G08980 Oryza punctata OPUNC09G08980 I
ORGLA02G0057000 Oryza glaberrima ORGLA02G0057000 I
ORGLA05G0236700 Oryza glaberrima ORGLA05G0236700 I
ORGLA06G0191100 Oryza glaberrima ORGLA06G0191100 I
ORGLA09G0076400 Oryza glaberrima ORGLA09G0076400 I
ORGLA09G0076500 Oryza glaberrima ORGLA09G0076500 I
ORUFI02G06290 Oryza rufipogon ORUFI02G06290 I
ORUFI05G29210 Oryza rufipogon ORUFI05G29210 I
ORUFI06G24530 Oryza rufipogon ORUFI06G24530 I
ORUFI09G11140 Oryza rufipogon ORUFI09G11140 I
ORUFI09G11150 Oryza rufipogon ORUFI09G11150 I
OS05G0583000 Oryza sativa OS05G0583000 I
OS06G0649000 Oryza sativa OS06G0649000 I
WRKY76 Oryza sativa OS09G0417600 I
WRKY62 Oryza sativa OS09G0417800 I
PGSC0003DMG400007387 Solanum tuberosum PGSC0003DMG400007387 I
PGSC0003DMG400019824 Solanum tuberosum PGSC0003DMG400019824 I
PGSC0003DMG400028520 Solanum tuberosum PGSC0003DMG400028520 I
PGSC0003DMG402007388 Solanum tuberosum PGSC0003DMG402007388 I
POPTR_0001s03620 Populus trichocarpa POPTR_0001s03620 I
POPTR_0006s27950 Populus trichocarpa POPTR_0006s27950 I
POPTR_0018s02470 Populus trichocarpa POPTR_0018s02470 I
POPTR_0018s02480 Populus trichocarpa POPTR_0018s02480 I
PRUPE_ppa008566mg Prunus persica PRUPE_ppa008566mg I
PRUPE_ppa009939mg Prunus persica PRUPE_ppa009939mg I
PRUPE_ppa010796mg Prunus persica PRUPE_ppa010796mg I
Sb02g024760 Sorghum bicolor Sb02g024760 I
Sb02g024765 Sorghum bicolor Sb02g024765 I
Sb04g005520 Sorghum bicolor Sb04g005520 I
Sb10g025590 Sorghum bicolor Sb10g025590 I
Sb10g025600 Sorghum bicolor Sb10g025600 I
Si006914m.g Setaria italica Si006914m.g I
Si017443m.g Setaria italica Si017443m.g I
Si030429m.g Setaria italica Si030429m.g I
Si030794m.g Setaria italica Si030794m.g I
Solyc03g116890.2 Solanum lycopersicum Solyc03g116890.2 I
Solyc06g068460.2 Solanum lycopersicum Solyc06g068460.2 I
Solyc08g067340.2 Solanum lycopersicum Solyc08g067340.2 I
Solyc08g067360.2 Solanum lycopersicum Solyc08g067360.2 I
Solyc12g042590.1 Solanum lycopersicum Solyc12g042590.1 I
TCM_027435 Theobroma cacao TCM_027435 I
TCM_036912 Theobroma cacao TCM_036912 I
TCM_036913 Theobroma cacao TCM_036913 I
Traes_5AL_7164FEAC3 Triticum aestivum Traes_5AL_7164FEAC3 I
Traes_5BL_8BEF7F9CD Triticum aestivum Traes_5BL_8BEF7F9CD I
Traes_5BL_90757F0CC Triticum aestivum Traes_5BL_90757F0CC I
Traes_5DL_32D78D06A Triticum aestivum Traes_5DL_32D78D06A I
Traes_6AS_DA75BB1FD Triticum aestivum Traes_6AS_DA75BB1FD I
Traes_6DS_8F684013D Triticum aestivum Traes_6DS_8F684013D I
Traes_7AL_AC56CC184 Triticum aestivum Traes_7AL_AC56CC184 I
Traes_7DL_5968FA56C Triticum aestivum Traes_7DL_5968FA56C I
Traes_7DL_B09854286 Triticum aestivum Traes_7DL_B09854286 I
Traes_7DL_B86B36F67 Triticum aestivum Traes_7DL_B86B36F67 I
Traes_7DL_F849918EA Triticum aestivum Traes_7DL_F849918EA I
TRIUR3_16802 Triticum urartu TRIUR3_16802 I
TRIUR3_16803 Triticum urartu TRIUR3_16803 I
TRIUR3_16804 Triticum urartu TRIUR3_16804 I
TRIUR3_24321 Triticum urartu TRIUR3_24321 I
TRIUR3_25260 Triticum urartu TRIUR3_25260 I
VIT_04s0008g05750 Vitis vinifera VIT_04s0008g05750 I
VIT_04s0008g05760 Vitis vinifera VIT_04s0008g05760 I
WRKY40 Vitis vinifera VIT_09s0018g00240 I
Ca_02925 Cicer arietinum Ca_02925 I
Ca_09101 Cicer arietinum Ca_09101 I
Ca_22917 Cicer arietinum Ca_22917 I
Cla017484 Citrullus lanatus Cla017484 I
Cla019419 Citrullus lanatus Cla019419 I
Cla021335 Citrullus lanatus Cla021335 I
Cla022703 Citrullus lanatus Cla022703 I
Pm005697 Prunus mume Pm005697 I
Pm005698 Prunus mume Pm005698 I
Pm013791 Prunus mume Pm013791 I
43951.m000016 Ricinus communis 43951.m000016 I
cassava18395.valid.m1 Manihot esculenta cassava18395.valid.m1 I
cassava20767.m1 Manihot esculenta cassava20767.m1 I
cassava36924.valid.m1 Manihot esculenta cassava36924.valid.m1 I
cassava37361.valid.m1 Manihot esculenta cassava37361.valid.m1 I
cassava8103.valid.m1 Manihot esculenta cassava8103.valid.m1 I
cassava8446.m1 Manihot esculenta cassava8446.m1 I
Cucsa.162810 Cucumis sativus Cucsa.162810 I
Cucsa.162820 Cucumis sativus Cucsa.162820 I
Cucsa.177230 Cucumis sativus Cucsa.177230 I
Cucsa.197550 Cucumis sativus Cucsa.197550 I
Cucsa.271570 Cucumis sativus Cucsa.271570 I
mgf006734m Mimulus guttatus mgf006734m I
mgf010377m Mimulus guttatus mgf010377m I
mgf013102m Mimulus guttatus mgf013102m I
mgf019151m Mimulus guttatus mgf019151m I
mgf024657m Mimulus guttatus mgf024657m I
Aquca_016_00214 Aquilegia coerulea Aquca_016_00214 I
Bostr.0556s0495 Boechera stricta Bostr.0556s0495 I
Bostr.20129s0425 Boechera stricta Bostr.20129s0425 I
Bostr.26326s0173 Boechera stricta Bostr.26326s0173 I
Bostr.7867s1032 Boechera stricta Bostr.7867s1032 I
Cagra.1725s0057 Capsella grandiflora Cagra.1725s0057 I
Cagra.2381s0005 Capsella grandiflora Cagra.2381s0005 I
Cagra.3807s0050 Capsella grandiflora Cagra.3807s0050 I
Carubv10005349m.g Capsella rubella Carubv10005349m.g I
Carubv10020726m.g Capsella rubella Carubv10020726m.g I
Carubv10023876m.g Capsella rubella Carubv10023876m.g I
Ciclev10008930m.g Citrus clementina Ciclev10008930m.g I
Ciclev10009250m.g Citrus clementina Ciclev10009250m.g I
Ciclev10026105m.g Citrus clementina Ciclev10026105m.g I
Eucgr.C01943 Eucalyptus grandis Eucgr.C01943 I
Eucgr.C02659 Eucalyptus grandis Eucgr.C02659 I
Eucgr.C02660 Eucalyptus grandis Eucgr.C02660 I
Eucgr.F03955 Eucalyptus grandis Eucgr.F03955 I
Eucgr.F04317 Eucalyptus grandis Eucgr.F04317 I
Eucgr.J03117 Eucalyptus grandis Eucgr.J03117 I
evm.TU.supercontig_10.75 Carica papaya evm.TU.supercontig_10.75 I
evm.TU.supercontig_127.25 Carica papaya evm.TU.supercontig_127.25 I
evm.TU.supercontig_127.27 Carica papaya evm.TU.supercontig_127.27 I
gene15013-v1.0-hybrid Fragaria vesca gene15013-v1.0-hybrid I
gene15014-v1.0-hybrid Fragaria vesca gene15014-v1.0-hybrid I
gene15841-v1.0-hybrid Fragaria vesca gene15841-v1.0-hybrid I
Gorai.001G037700 Gossypium raimondii Gorai.001G037700 I
Gorai.001G037800 Gossypium raimondii Gorai.001G037800 I
Gorai.006G025700 Gossypium raimondii Gorai.006G025700 I
Gorai.009G062300 Gossypium raimondii Gorai.009G062300 I
Gorai.009G062400 Gossypium raimondii Gorai.009G062400 I
Gorai.009G124000 Gossypium raimondii Gorai.009G124000 I
Gorai.010G118300 Gossypium raimondii Gorai.010G118300 I
Gorai.010G222400 Gossypium raimondii Gorai.010G222400 I
Lus10002309.g Linum usitatissimum Lus10002309.g I
Lus10024074.g Linum usitatissimum Lus10024074.g I
Lus10026082.g Linum usitatissimum Lus10026082.g I
Lus10041660.g Linum usitatissimum Lus10041660.g I
MDP0000161881 Malus domestica MDP0000161881 I
MDP0000177906 Malus domestica MDP0000177906 I
MDP0000228838 Malus domestica MDP0000228838 I
MDP0000263349 Malus domestica MDP0000263349 I
MDP0000263961 Malus domestica MDP0000263961 I
MDP0000307516 Malus domestica MDP0000307516 I
MDP0000418900 Malus domestica MDP0000418900 I
MDP0000689162 Malus domestica MDP0000689162 I
MDP0000794439 Malus domestica MDP0000794439 I
orange1.1g020831m.g Citrus sinensis orange1.1g020831m.g I
orange1.1g025097m.g Citrus sinensis orange1.1g025097m.g I
Pavir.Aa03147 Panicum virgatum Pavir.Aa03147 I
Pavir.Ba01849 Panicum virgatum Pavir.Ba01849 I
Pavir.Ba01850 Panicum virgatum Pavir.Ba01850 I
Pavir.Bb02115 Panicum virgatum Pavir.Bb02115 I
Pavir.Bb02124 Panicum virgatum Pavir.Bb02124 I
Pavir.Da00323 Panicum virgatum Pavir.Da00323 I
Pavir.J15967 Panicum virgatum Pavir.J15967 I
Pavir.J39636 Panicum virgatum Pavir.J39636 I
SapurV1A.0153s0580 Salix purpurea SapurV1A.0153s0580 I
SapurV1A.0184s0040 Salix purpurea SapurV1A.0184s0040 I
SapurV1A.0280s0370 Salix purpurea SapurV1A.0280s0370 I
SapurV1A.0372s0170 Salix purpurea SapurV1A.0372s0170 I
SapurV1A.0372s0180 Salix purpurea SapurV1A.0372s0180 I
Thhalv10000288m.g Eutrema salsugineum Thhalv10000288m.g I
Thhalv10018925m.g Eutrema salsugineum Thhalv10018925m.g I
Thhalv10025785m.g Eutrema salsugineum Thhalv10025785m.g I
PK08451.1 Cannabis sativa PK08451.1 I
PK20163.1 Cannabis sativa PK20163.1 I
chr1.CM0123.240.nc Lotus japonicus chr1.CM0123.240.nc I
chr1.CM0433.120.nd Lotus japonicus chr1.CM0433.120.nd I
chr5.CM0040.550.nd Lotus japonicus chr5.CM0040.550.nd I
chr5.CM0040.670.nd Lotus japonicus chr5.CM0040.670.nd I
LjSGA_046833.1 Lotus japonicus LjSGA_046833.1 I
LjT45M09.20.nd Lotus japonicus LjT45M09.20.nd I
PDK_20s1368561g002 Phoenix dactylifera PDK_20s1368561g002 I
PDK_20s1541671g001 Phoenix dactylifera PDK_20s1541671g001 I
PDK_20s1899311g001 Phoenix dactylifera PDK_20s1899311g001 I