CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AAI67525
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
AAI67525
T143632_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI67525
C2H2 ZF
66
88
FTCTQCGKSFGRKHNLKIHMRIH
AAI67525
C2H2 ZF
94
116
YTCNQCGKSFNQSSNLYNHMMIH
AAI67525
C2H2 ZF
122
144
FKCTQCGKSFNRSSDLHQHMRIH
AAI67525
C2H2 ZF
150
172
FTCTQCGKSFYCSSHLHQHMRIH
AAI67525
C2H2 ZF
178
200
FTCSQCGKSFRQSSNFKQHMRIH
AAI67525
C2H2 ZF
206
217
FTCTQCGKSFNQ
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC01G11960
Oryza punctata
OPUNC01G11960
N
Pavir.Eb01272
Panicum virgatum
Pavir.Eb01272
N
Pavir.Ea01625
Panicum virgatum
Pavir.Ea01625
N
TRIUR3_24010
Triticum urartu
TRIUR3_24010
N
Traes_7DS_3880F0FD0
Triticum aestivum
Traes_7DS_3880F0FD0
N
Traes_7BS_7ACA0B10A
Triticum aestivum
Traes_7BS_7ACA0B10A
N
Traes_7AS_FB2A769B5
Triticum aestivum
Traes_7AS_FB2A769B5
N
Si000259m.g
Setaria italica
Si000259m.g
N
Sb03g011920
Sorghum bicolor
Sb03g011920
N
SPL1
Oryza sativa
OS01G0292900
N
ORUFI01G13230
Oryza rufipogon
ORUFI01G13230
N
ORGLA01G0103500
Oryza glaberrima
ORGLA01G0103500
N
BGIOSGA003313
Oryza indica
BGIOSGA003313
N
ONIVA01G14480
Oryza nivara
ONIVA01G14480
N
OLONG_017800
Oryza longistaminata
OLONG_017800
N
OGLUM01G13730
Oryza glumaepatula
OGLUM01G13730
N
OBART01G12270
Oryza barthii
OBART01G12270
N
OBART01G12250
Oryza barthii
OBART01G12250
N
OB01G22010
Oryza brachyantha
OB01G22010
N
MLOC_34539
Hordeum vulgare
MLOC_34539
N
GRMZM2G133646
Zea mays
GRMZM2G133646
N
GRMZM2G081127
Zea mays
GRMZM2G081127
N
F775_04036
Aegilops tauschii
F775_04036
N