LCUP006861 (Lucilia cuprina)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 LCUP006861 T144253_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sna
M03670_2.00
Drosophila melanogaster
TRCACCTGTYVB

VBRACAGGTGYA
SELEX
Nitta et al.(2015)
sna_1
0.797 0.921
sna
M05862_2.00
Drosophila melanogaster
NNVCACCTGTYNN

NNRACAGGTGBNN
SMiLE-seq
Isakova et al.(2017)
Sna
0.797 0.921
sna
M06069_2.00
Drosophila melanogaster
SMACYTGYBN

NVRCARGTKS
B1H
Zhu et al.(2011)
sna_FlyReg_FBgn0003448
0.797 0.921
sna
M06070_2.00
Drosophila melanogaster
SCACCTGWYV

BRWCAGGTGS
B1H
Zhu et al.(2011)
sna_SANGER_10_FBgn0003448
0.797 0.921
sna
M06071_2.00
Drosophila melanogaster
MCACCTGTYVHNNN

NNNDBRACAGGTGK
B1H
Zhu et al.(2011)
sna_SOLEXA_5_FBgn0003448
0.797 0.921
sna
M09664_2.00
Drosophila melanogaster
VMACCTGYB

VRCAGGTKB
Misc
Kulakovskiy et al.(2009)
sna
0.797 0.921
sna
M10375_2.00
Drosophila melanogaster
NKRCACCTGTYNB

VNRACAGGTGYMN
Transfac
Matys et al.(2006)
I$SN_01
0.797 0.921
sna
M10376_2.00
Drosophila melanogaster
WSBHADCAVSTKSK

MSMASBTGHTDVSW
Transfac
Matys et al.(2006)
I$SN_02
0.797 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP006861-PA C2H2 ZF 270 292
LCUP006861-PA C2H2 ZF 305 327
LCUP006861-PA C2H2 ZF 331 353
LCUP006861-PA C2H2 ZF 359 381
LCUP006861-PA C2H2 ZF 387 408

Links

Other C2H2 ZF family TFs
Other Lucilia cuprina TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POU6F2 Homo sapiens ENSG00000106536 D 0.000
Brh_R001259 Buceros rhinoceros Brh_R001259 I 0.000
ENSOGAG00000033061 Otolemur garnettii ENSOGAG00000033061 I 0.000
ENSPANG00000007998 Papio anubis ENSPANG00000007998 I 0.000
ENSPSIG00000017568 Pelodiscus sinensis ENSPSIG00000017568 I 0.000
POU6F2 Pan troglodytes ENSPTRG00000019105 I 0.000
POU6F2 Pteropus vampyrus ENSPVAG00000012960 I 0.000
Pou6f2 Rattus norvegicus ENSRNOG00000013237 I 0.000
ENSSTOG00000023336 Ictidomys tridecemlineatus ENSSTOG00000023336 I 0.000
POU6F2 Taeniopygia guttata ENSTGUG00000001859 I 0.000
Aan_R014018 Calypte anna Aan_R014018 I 0.000
Afo_R007505 Aptenodytes forsteri Afo_R007505 I 0.000
ENSNLEG00000003036 Nomascus leucogenys ENSNLEG00000003036 I 0.000
ENSP00000395926-D1 Bos grunniens ENSP00000395926-D1 I 0.000
ENSP00000395926 Macaca fascicularis ENSP00000395926 I 0.000
Gfo_R007861 Geospiza fortis Gfo_R007861 I 0.000
Myotis_brandtii_POU6F2_10011220 Myotis brandtii Myotis_brandtii_POU6F2_10011220 I 0.000
Ogr18087 Ophisaurus gracilis Ogr18087 I 0.000
Pvit_04153 Pogona vitticeps Pvit_04153 I 0.000
Tal_R002298 Tyto alba Tal_R002298 I 0.000
pou6f2 Xenopus tropicalis XB-GENE-853682 I 0.000
ENSLACG00000002338 Latimeria chalumnae ENSLACG00000002338 I 0.000
POU6F2 Canis familiaris ENSCAFG00000003571 I 0.000
ENSCPOG00000012221 Cavia porcellus ENSCPOG00000012221 I 0.000
ENSCSAG00000015201 Chlorocebus sabaeus ENSCSAG00000015201 I 0.000
POU6F2 Equus caballus ENSECAG00000013209 I 0.000
POU6F2 Erinaceus europaeus ENSEEUG00000006653 I 0.000
POU6F2 Echinops telfairi ENSETEG00000016373 I 0.000
ENSFALG00000005224 Ficedula albicollis ENSFALG00000005224 I 0.000
ENSFCAG00000008102 Felis catus ENSFCAG00000008102 I 0.000
POU6F2 Gorilla gorilla ENSGGOG00000006718 I 0.000
ENSOARG00000017698 Ovis aries ENSOARG00000017698 I 0.000
POU6F2 Loxodonta africana ENSLAFG00000008294 I 0.000
ENSLOCG00000011317 Lepisosteus oculatus ENSLOCG00000011317 I 0.000
ENSMGAG00000012235 Meleagris gallopavo ENSMGAG00000012235 I 0.000
POU6F2 Microcebus murinus ENSMICG00000007361 I 0.000
ENSMLUG00000002698 Myotis lucifugus ENSMLUG00000002698 I 0.000
POU6F2 Macaca mulatta ENSMMUG00000017106 I 0.000
ENSMPUG00000018132 Mustela putorius furo ENSMPUG00000018132 I 0.000
Pou6f2 Mus musculus ENSMUSG00000009734 I 0.000
ENSAPLG00000005140 Anas platyrhynchos ENSAPLG00000005140 I 0.000