CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP009846
(
Lucilia cuprina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LCUP009846
T144298_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cbt
M03705_2.00
Drosophila melanogaster
DMCACRCCCMY
RKGGGYGTGKH
SELEX
Nitta et al.(2015)
cbt_1
0.808
0.957
cbt
M03706_2.00
Drosophila melanogaster
RMCRCGCCCMCHH
DDGKGGGCGYGKY
SELEX
Nitta et al.(2015)
cbt_2
0.808
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP009846-PA
C2H2 ZF
368
392
YECNHPDCGKNYFKSSHLKAHQRVH
LCUP009846-PA
C2H2 ZF
398
422
FICKWENCDKRFSRSDELSRHKRTH
LCUP009846-PA
C2H2 ZF
428
450
FVCSVCDKKFMRSDHLSKHVKRH
Links
Other
C2H2 ZF
family TFs
Other
Lucilia cuprina
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action