LDEC006538 (Leptinotarsa decemlineata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 LDEC006538 T144607_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu
M03680_2.00 		Drosophila melanogaster
HCCRCCCACGCAH
DTGCGTGGGYGGD		 SELEX
Nitta et al.(2015)
klu_1 		0.807 0.946
klu
M03681_2.00 		Drosophila melanogaster
YMCGCCCMCGCAH
DTGCGKGGGCGKR		 SELEX
Nitta et al.(2015)
klu_2 		0.807 0.946
klu
M06114_2.00 		Drosophila melanogaster
MCACCCMCRCA
TGYGKGGGTGK		 B1H
Zhu et al.(2011)
klu_SANGER_10_FBgn0013469 		0.807 0.946
klu
M06115_2.00 		Drosophila melanogaster
NNNNMCACCCMCRCN
NGYGKGGGTGKNNNN		 B1H
Zhu et al.(2011)
klu_SOLEXA_5_FBgn0013469 		0.807 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC006538-PA C2H2 ZF 378 401
LDEC006538-PA C2H2 ZF 415 437
LDEC006538-PA C2H2 ZF 443 465
LDEC006538-PA C2H2 ZF 471 493

Links

Other C2H2 ZF family TFs
Other Leptinotarsa decemlineata TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCDUO_17222 Ancylostoma duodenale ANCDUO_17222 N
CGOC_0001347601 Cylicostephanus goldi CGOC_0001347601 N
GPLIN_000554300 Globodera pallida GPLIN_000554300 N
maker-nMf.1.1.scaf00641-snap-gene-0.11 Meloidogyne floridensis maker-nMf.1.1.scaf00641-snap-gene-0.11 N
NBR_0000655401 Nippostrongylus brasiliensis NBR_0000655401 N
NECAME_00548 Necator americanus NECAME_00548 N
SROB_0000835501 Schistosoma rodhaini SROB_0000835501 N
TTAC_0000382701 Hydatigera taeniaeformis TTAC_0000382701 N