CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU00285
(
Neurospora crassa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NCU00285
T144837_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU00285
M01869_2.00
Neurospora crassa
NNRCCYDRN
NYHRGGYNN
PBM
Weirauch et al.(2014)
pTH8803
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01869_2.00
C2H2 ZF
52
78
YRCKVEGCQNARFSSTACLLRHEREAH
M01869_2.00
C2H2 ZF
88
118
YLCTYEGCERSLPGHGFPRQWNLRDHMRRVH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU00285.1
C2H2 ZF
400
426
YRCKVEGCQNARFSSTACLLRHEREAH
NCU00285.1
C2H2 ZF
436
466
YLCTYEGCERSLPGHGFPRQWNLRDHMRRVH
NCU00285.2
C2H2 ZF
382
408
YRCKVEGCQNARFSSTACLLRHEREAH
NCU00285.2
C2H2 ZF
418
448
YLCTYEGCERSLPGHGFPRQWNLRDHMRRVH
Links
Other
C2H2 ZF
family TFs
Other
Neurospora crassa
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy