CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU01122
(
Neurospora crassa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NCU01122
T144840_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01122
M01872_2.00
Neurospora crassa
NHCCCRC
GYGGGDN
PBM
Weirauch et al.(2014)
pTH8915
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01872_2.00
C2H2 ZF
52
76
FACNYEDCNKVYSRAEHLQRHQLNH
M01872_2.00
C2H2 ZF
82
106
YRCDFAGCEQQFVRADLLSRHRKRH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU01122.1
C2H2 ZF
54
78
FACNYEDCNKVYSRAEHLQRHQLNH
NCU01122.1
C2H2 ZF
84
108
YRCDFAGCEQQFVRADLLSRHRKRH
NCU01122.2
C2H2 ZF
54
78
FACNYEDCNKVYSRAEHLQRHQLNH
NCU01122.2
C2H2 ZF
84
108
YRCDFAGCEQQFVRADLLSRHRKRH
Links
Other
C2H2 ZF
family TFs
Other
Neurospora crassa
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy