NCU03975 (Neurospora crassa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 NCU03975 T144856_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03975
M01879_2.00		 Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN		 PBM
Weirauch et al.(2014)
pTH9677		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HCBG_04116
M01448_2.00 		Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY		 PBM
Najafabadi et al.(2015a)
pTH11149 		0.798 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01879_2.00 C2H2 ZF 52 74
M01879_2.00 C2H2 ZF 80 104
M01879_2.00 C2H2 ZF 110 132
M01879_2.00 C2H2 ZF 138 162

DNA Binding Domains

Protein ID Domain From To Sequence
NCU03975 C2H2 ZF 215 237
NCU03975 C2H2 ZF 243 267
NCU03975 C2H2 ZF 273 295
NCU03975 C2H2 ZF 301 325

Links

Other C2H2 ZF family TFs
Other Neurospora crassa TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
USF3 Tursiops truncatus ENSTTRG00000000281 N 0.000
USF3 Ochotona princeps ENSOPRG00000014253 N 0.000
ENSPANG00000019193 Papio anubis ENSPANG00000019193 N 0.000
ENSPPYG00000013537 Pongo abelii ENSPPYG00000013537 N 0.000
USF3 Pan troglodytes ENSPTRG00000030159 N 0.000
USF3 Pteropus vampyrus ENSPVAG00000006151 N 0.000
Usf3 Rattus norvegicus ENSRNOG00000027756 N 0.000
ENSSHAG00000006667 Sarcophilus harrisii ENSSHAG00000006667 N 0.000
USF3 Sus scrofa ENSSSCG00000011918 N 0.000
ENSSTOG00000029223 Ictidomys tridecemlineatus ENSSTOG00000029223 N 0.000
ENSTGUG00000013363 Taeniopygia guttata ENSTGUG00000013363 N 0.000
ENSTGUG00000013682 Taeniopygia guttata ENSTGUG00000013682 N 0.000
USF3 Otolemur garnettii ENSOGAG00000032665 N 0.000
USF3 Vicugna pacos ENSVPAG00000011950 N 0.000
Afo_R005482 Aptenodytes forsteri Afo_R005482 N 0.000
Alligator_sinensis_CCG000203.1 Alligator sinensis Alligator_sinensis_CCG000203.1 N 0.000
Brh_R007650 Buceros rhinoceros Brh_R007650 N 0.000
ENSP00000420721-D1 Bos grunniens ENSP00000420721-D1 N 0.000
ENSP00000420721 Macaca fascicularis ENSP00000420721 N 0.000
Gfo_R000246 Geospiza fortis Gfo_R000246 N 0.000
Myotis_brandtii_KIAA2018_10016078 Myotis brandtii Myotis_brandtii_KIAA2018_10016078 N 0.000
Pvit_04479 Pogona vitticeps Pvit_04479 N 0.000
Tal_R000800 Tyto alba Tal_R000800 N 0.000
usf3 Xenopus tropicalis XB-GENE-6459248 N 0.000
ENSGALG00000014808 Gallus gallus ENSGALG00000014808 N 0.000
ENSAMEG00000005235 Ailuropoda melanoleuca ENSAMEG00000005235 N 0.000
USF3 Bos taurus ENSBTAG00000021000 N 0.000
USF3 Canis familiaris ENSCAFG00000010692 N 0.000
USF3 Callithrix jacchus ENSCJAG00000020264 N 0.000
ENSCPOG00000006428 Cavia porcellus ENSCPOG00000006428 N 0.000
ENSCSAG00000006785 Chlorocebus sabaeus ENSCSAG00000006785 N 0.000
USF3 Dasypus novemcinctus ENSDNOG00000040900 N 0.000
USF3 Equus caballus ENSECAG00000024549 N 0.000
ENSFALG00000005129 Ficedula albicollis ENSFALG00000005129 N 0.000
USF3 Felis catus ENSFCAG00000004876 N 0.000
USF3 Homo sapiens ENSG00000176542 N 0.000
USF3 Anolis carolinensis ENSACAG00000006745 N 0.000
USF3 Gorilla gorilla ENSGGOG00000001005 N 0.000
ENSGMOG00000015548 Gadus morhua ENSGMOG00000015548 N 0.000
USF3 Loxodonta africana ENSLAFG00000009455 N 0.000
ENSLOCG00000003056 Lepisosteus oculatus ENSLOCG00000003056 N 0.000
USF3 Meleagris gallopavo ENSMGAG00000014246 N 0.000
USF3 Myotis lucifugus ENSMLUG00000004274 N 0.000
USF3 Monodelphis domestica ENSMODG00000018158 N 0.000
Usf3 Mus musculus ENSMUSG00000068284 N 0.000
ENSNLEG00000004615 Nomascus leucogenys ENSNLEG00000004615 N 0.000
ENSOARG00000019468 Ovis aries ENSOARG00000019468 N 0.000
USF3 Oryctolagus cuniculus ENSOCUG00000013550 N 0.000