Scas_Contig720.33 (Saccharomyces castellii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Scas_Contig720.33 T144982_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Scas_Contig720.33
M01042_2.00		 Saccharomyces castellii
NNKKVCCTKD
HMAGGBMMNN		 PBM
Siggers et al.(2014)
Scas720.33Scas		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01042_2.00 C2H2 ZF 15 40
M01042_2.00 C2H2 ZF 46 69

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig720.33 C2H2 ZF 15 40
Scas_Contig720.33 C2H2 ZF 46 69

Links

Other C2H2 ZF family TFs
Other Saccharomyces castellii TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB02G21030 Oryza brachyantha OB02G21030 N
OLONG_021963 Oryza longistaminata OLONG_021963 N
ORGLA02G0111800 Oryza glaberrima ORGLA02G0111800 N
OS02G0284500 Oryza sativa OS02G0284500 N