CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15013328
(
Schmidtea mediterranea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMU15013328
T145116_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15013328
C2H2 ZF
97
120
YRCPSCPQSYQNANAFTKHMREKH
SMU15013328
C2H2 ZF
125
148
YTCRQCEQFYETLSQLFLHARRTH
SMU15013328
C2H2 ZF
163
185
FHCPDCNYMTNNGGTMEHHRRAH
SMU15013328
C2H2 ZF
191
213
FSCDICGKHFAQKANMKTHKNRH
SMU15013328
C2H2 ZF
220
244
FRCETCGKAFNSYDIYLAHLRTREH
SMU15013328
C2H2 ZF
262
281
CMGCNNTFDSMFNLNKHTRS
SMU15013328
C2H2 ZF
320
344
ISCPVCGERGFPGFNQLNHHITRAH
SMU15013328
C2H2 ZF
352
375
HVCRYCESTFESKKDLDGHISDMH
Links
Other
C2H2 ZF
family TFs
Other
Schmidtea mediterranea
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ECPE_0000534001
Echinostoma caproni
ECPE_0000534001
N
TsM_000285500
Taenia solium
TsM_000285500
N
TRE_0001500801
Trichobilharzia regenti
TRE_0001500801
N
T265_10889
Opisthorchis viverrini
T265_10889
N
SROB_0001771201
Schistosoma rodhaini
SROB_0001771201
N
SPER_0000351001
Spirometra erinaceieuropaei
SPER_0000351001
N
SMTD_0001318301
Schistosoma mattheei
SMTD_0001318301
N
SCUD_0001095001
Schistosoma curassoni
SCUD_0001095001
N
HNAJ_0000100001
Hymenolepis nana
HNAJ_0000100001
N
HmN_000179900
Hymenolepis microstoma
HmN_000179900
N
EmuJ_000792100
Echinococcus multilocularis
EmuJ_000792100
N
Smp_086270
Schistosoma mansoni
Smp_086270
N
ECANG7_04679
Echinococcus canadensis
ECANG7_04679
N
D915_01733
Fasciola hepatica
D915_01733
N
csin102737
Clonorchis sinensis
csin102737
N
SMU15036604
Schmidtea mediterranea
SMU15036604
N
SMU15026484
Schmidtea mediterranea
SMU15026484
N
SMU15018257
Schmidtea mediterranea
SMU15018257
N
SMU15018256
Schmidtea mediterranea
SMU15018256
N
SMU15018255
Schmidtea mediterranea
SMU15018255
N
SMU15001862
Schmidtea mediterranea
SMU15001862
N