CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15031804
(
Schmidtea mediterranea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMU15031804
T145182_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15031804
C2H2 ZF
186
207
HCAFCDDVRNRPALLERHLRVH
SMU15031804
C2H2 ZF
214
235
KCQQCYKSFANSSTLKQHMNTH
SMU15031804
C2H2 ZF
241
263
YICSICDQGFAANSNLAFHMEIH
SMU15031804
C2H2 ZF
286
308
HKCRICSKMFSTPSELQSHGYSH
SMU15031804
C2H2 ZF
314
335
YQCEKCDSSYAKYSNYIKHRRK
Links
Other
C2H2 ZF
family TFs
Other
Schmidtea mediterranea
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g33285
Steinernema feltiae
L889_g33285
N
TCLT_0000846601
Thelazia callipaeda
TCLT_0000846601
N
SMUV_0000679801
Syphacia muris
SMUV_0000679801
N
PTRK_0001373600
Parastrongyloides trichosuri
PTRK_0001373600
N
OFLC_0001390101
Onchocerca flexuosa
OFLC_0001390101
N
OFLC_0000545801
Onchocerca flexuosa
OFLC_0000545801
N
OESDEN_12940
Oesophagostomum dentatum
OESDEN_12940
N
OESDEN_11610
Oesophagostomum dentatum
OESDEN_11610
N
nDi.2.2.2.g08137
Dirofilaria immitis
nDi.2.2.2.g08137
N
maker-nMf.1.1.scaf03581-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf03581-augustus-gene-0.6
N
maker-nMf.1.1.scaf01421-snap-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf01421-snap-gene-0.8
N
L898_g19329
Steinernema monticolum
L898_g19329
N
L893_g10062
Steinernema glaseri
L893_g10062
N
L892_g5885
Steinernema scapterisci
L892_g5885
N
WUBG_03674
Wuchereria bancrofti
WUBG_03674
N
L596_g6742
Steinernema carpocapsae
L596_g6742
N
HPLM_0000734701
Haemonchus placei
HPLM_0000734701
N
HCOI00981900
Haemonchus contortus
HCOI00981900
N
EEL_0001004901
Elaeophora elaphi
EEL_0001004901
N
DME_0000790101
Dracunculus medinensis
DME_0000790101
N
DICVIV_04780
Dictyocaulus viviparus
DICVIV_04780
N
BXY_0902500
Bursaphelenchus xylophilus
BXY_0902500
N
BTMF_0000180701
Brugia timori
BTMF_0000180701
N
ANCCEY_00556
Ancylostoma ceylanicum
ANCCEY_00556
N
ACOC_0000250201
Angiostrongylus costaricensis
ACOC_0000250201
N
Minc16567
Meloidogyne incognita
Minc16567
N
WBGene00244828
Onchocerca volvulus
WBGene00244828
N
WUBG_06180
Wuchereria bancrofti
WUBG_06180
N