CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002935061
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XP_002935061
T145761_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002935061
C2H2 ZF
162
185
LCGWKDCDLSCKSRWKLREHLRSH
XP_002935061
C2H2 ZF
191
212
VSCPNCGGMFANNTKFYDHLRR
XP_002935061
C2H2 ZF
221
243
FQCSHCSKRFATERLLRDHMRNH
XP_002935061
C2H2 ZF
247
270
YKCPLCDMTCPLPSSLRSHIRFRH
XP_002935061
C2H2 ZF
276
298
FKCQHCEYSCKNLVDLRRHQDTH
XP_002935061
C2H2 ZF
337
360
YKCHVCEKCFTRGNNLTVHLRKKH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PV05_08543
Exophiala xenobiotica
PV05_08543
N
Z519_03781
Cladophialophora bantiana
Z519_03781
N
Z518_02817
Rhinocladiella mackenziei
Z518_02817
N
Z517_01146
Fonsecaea pedrosoi
Z517_01146
N
SS1G_01198
Sclerotinia sclerotiorum
SS1G_01198
N
PV11_07414
Exophiala sideris
PV11_07414
N
PV10_08159
Exophiala mesophila
PV10_08159
N
PV08_08909
Exophiala spinifera
PV08_08909
N
PV07_03546
Cladophialophora immunda
PV07_03546
N
PV06_05190
Exophiala oligosperma
PV06_05190
N
A1O1_06406
Capronia coronata
A1O1_06406
N
PV04_06387
Capronia semiimmersa
PV04_06387
N
OIDMADRAFT_161483
Oidiodendron maius
OIDMADRAFT_161483
N
MBM_08586
Marssonina brunnea
MBM_08586
N
G647_06532
Cladophialophora carrionii
G647_06532
N
A1O9_07734
Exophiala aquamarina
A1O9_07734
N
A1O7_06006
Cladophialophora yegresii
A1O7_06006
N
A1O5_08873
Cladophialophora psammophila
A1O5_08873
N
A1O3_10024
Capronia epimyces
A1O3_10024
N