13440_YKL062W (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 13440_YKL062W T145918_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MSN4
M00032_2.00 		Saccharomyces cerevisiae
NYCCCYNN
NNRGGGRN		 PBM
Badis et al.(2008)
MSN4_2121 		0.827 1.000
MSN4
M07462_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0342.1 		0.827 1.000
MSN4
M08533_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 Misc
DeBoer et al.(2011)
YKL062W_518 		0.827 1.000
KLLA0_F26961g
M01039_2.00 		Kluyveromyces lactis
CYCCYTD
HARGGRG		 PBM
Siggers et al.(2014)
KLLA0F29691gKlac 		0.787 0.826
MSN2
M00036_2.00 		Saccharomyces cerevisiae
NVCCCCTK
MAGGGGBN		 PBM
Badis et al.(2008)
MSN2_2101 		0.781 0.761
MSN2
M07466_2.00 		Saccharomyces cerevisiae
CCCCY
RGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0341.1 		0.781 0.761
MSN2
M08538_2.00 		Saccharomyces cerevisiae
NHYCCKN
NMGGRDN		 Misc
DeBoer et al.(2011)
YMR037C_1380 		0.781 0.761
MSN2
M10399_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MSN2_Q4 		0.781 0.761
CAGL0M13189g
M01034_2.00 		Candida glabrata
MYCCBBDNN
NNHVVGGRK		 PBM
Siggers et al.(2014)
CAGL0M13189gCgla 		0.774 0.891
CaO19.4752
M01035_2.00 		Candida albicans
VCCCCYDNNN
NNNHRGGGGB		 PBM
Siggers et al.(2014)
Msn4_orf19.4752Calb 		0.761 0.783
CAGL0F05995g
M01032_2.00 		Candida glabrata
NYCCYYNN
NNRRGGRN		 PBM
Siggers et al.(2014)
CAGL0F05995gCgla 		0.757 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
13440_YKL062W C2H2 ZF 584 607
13440_YKL062W C2H2 ZF 613 635

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CAGL0F05995g Candida glabrata CAGL0F05995g D 0.757
CAGL0M13189g Candida glabrata CAGL0M13189g D 0.774
CaO19.4752 Candida albicans CaO19.4752 D 0.761
MSN4 Saccharomyces cerevisiae YKL062W D 0.827
MSN2 Saccharomyces cerevisiae YMR037C D 0.781
KLLA0_F26961g Kluyveromyces lactis KLLA0_F26961g D 0.787
13715_YKL062W Saccharomyces paradoxus 13715_YKL062W I 0.827
TBLA_0H02830 Tetrapisispora blattae TBLA_0H02830 I 0.781
TDEL_0B06910 Torulaspora delbrueckii TDEL_0B06910 I 0.821
TPHA_0C02580 Tetrapisispora phaffii TPHA_0C02580 I 0.787
TPHA_0N01460 Tetrapisispora phaffii TPHA_0N01460 I 0.781
ZBAI_03527 Zygosaccharomyces bailii ZBAI_03527 I 0.816
ZBAI_08525 Zygosaccharomyces bailii ZBAI_08525 I 0.816
ZYRO0F01012g Zygosaccharomyces rouxii ZYRO0F01012g I 0.821
Scas_Contig649.28 Saccharomyces castellii Scas_Contig649.28 I 0.816
Scas_Contig649.29 Saccharomyces castellii Scas_Contig649.29 I 0.816
Scas_Contig709.32 Saccharomyces castellii Scas_Contig709.32 I 0.785
SU7_1995 Saccharomyces arboricola SU7_1995 I 0.822
14538_YKL062W Saccharomyces bayanus 14538_YKL062W I 0.803
16548_YMR037C Saccharomyces mikatae 16548_YMR037C I 0.781
17169_YMR037C Saccharomyces paradoxus 17169_YMR037C I 0.781
17588_YMR037C Saccharomyces bayanus 17588_YMR037C I 0.781
KLTH0D08734g Kluyveromyces thermotolerans KLTH0D08734g I 0.781
Kwal_8351 Kluyveromyces waltii Kwal_8351 I 0.781
SAKL0B11330g Lachancea kluyveri SAKL0B11330g I 0.781
Kpol_1013p21 Vanderwaltozyma polyspora Kpol_1013p21 I 0.787
AGOS_ABR089C Ashbya gossypii AGOS_ABR089C I 0.781
BN7_2125 Wickerhamomyces ciferrii BN7_2125 I 0.757
CaO19.12215 Candida albicans CaO19.12215 I 0.761
CD36_08440 Candida dubliniensis CD36_08440 I 0.761
Ecym_2301 Eremothecium cymbalariae Ecym_2301 I 0.781
KAFR_0A02320 Kazachstania africana KAFR_0A02320 I 0.805
KAFR_0F02070 Kazachstania africana KAFR_0F02070 I 0.786
KLTH0D08734g Lachancea thermotolerans KLTH0D08734g I 0.781
KNAG_0H00550 Kazachstania naganishii KNAG_0H00550 I 0.805
KNAG_0M02310 Kazachstania naganishii KNAG_0M02310 I 0.757
TBLA_0G01920 Tetrapisispora blattae TBLA_0G01920 I 0.787
Kpol_185p3 Vanderwaltozyma polyspora Kpol_185p3 I 0.811
LALA0_S09e05358g Lachancea lanzarotensis LALA0_S09e05358g I 0.781
NCAS_0A12910 Naumovozyma castellii NCAS_0A12910 I 0.785
NCAS_0H03080 Naumovozyma castellii NCAS_0H03080 I 0.816
NDAI_0B01340 Naumovozyma dairenensis NDAI_0B01340 I 0.781
NDAI_0C00560 Naumovozyma dairenensis NDAI_0C00560 I 0.798
SKUD_158203 Saccharomyces kudriavzevii SKUD_158203 I 0.827
AACERI_AaceriABR089C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR089C I 0.781
SU7_2517 Saccharomyces arboricola SU7_2517 I 0.781