CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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16206_YLR131C
(
Saccharomyces bayanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
16206_YLR131C
T145928_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ACE2
M00033_2.00
Saccharomyces cerevisiae
NTGCTGGBYN
NRVCCAGCAN
PBM
Badis et al.(2008)
ACE2_2082
0.807
0.925
ACE2
M07463_2.00
Saccharomyces cerevisiae
NGCTGGB
VCCAGCN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0267.1
0.807
0.925
ACE2
M08534_2.00
Saccharomyces cerevisiae
NGCTGGBH
DVCCAGCN
Misc
DeBoer et al.(2011)
YLR131C_1332
0.807
0.925
SWI5
M00020_2.00
Saccharomyces cerevisiae
NNKGCTGGTHN
NDACCAGCMNN
PBM
Badis et al.(2008)
SWI5_2037
0.777
0.836
SWI5
M07450_2.00
Saccharomyces cerevisiae
KGCTGGKH
DMCCAGCM
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0402.1
0.777
0.836
SWI5
M08516_2.00
Saccharomyces cerevisiae
KGCTGGKH
DMCCAGCM
Misc
DeBoer et al.(2011)
YDR146C_569
0.777
0.836
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
16206_YLR131C
C2H2 ZF
597
621
FECLYPNCSKVFKRRYNIRSHIQTH
16206_YLR131C
C2H2 ZF
627
651
YSCDFPSCDKAFVRNHDLIRHKISH
16206_YLR131C
C2H2 ZF
656
676
YVCPCGKRFNREDALMVHRSR
Links
Other
C2H2 ZF
family TFs
Other
Saccharomyces bayanus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SWI5
Saccharomyces cerevisiae
YDR146C
D
0.777
ACE2
Saccharomyces cerevisiae
YLR131C
D
0.807
SU7_2211
Saccharomyces arboricola
SU7_2211
I
0.810
14324_YLR131C
Saccharomyces paradoxus
14324_YLR131C
I
0.807
3580_YDR146C
Saccharomyces mikatae
3580_YDR146C
I
0.777
4131_Multiple
Saccharomyces bayanus
4131_Multiple
I
0.777
4284_YDR146C
Saccharomyces paradoxus
4284_YDR146C
I
0.777
TBLA_0H01260
Tetrapisispora blattae
TBLA_0H01260
N
0.760