18885_YNL027W (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 18885_YNL027W T145941_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRZ1
M00038_2.00 		Saccharomyces cerevisiae
NNDCTRHGCCNN
NNGGCDYAGHNN		 PBM
Badis et al.(2008)
CRZ1_4531 		0.827 1.000
CRZ1
M07468_2.00 		Saccharomyces cerevisiae
NNVMGCCHC
GDGGCKBNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0285.1 		0.827 1.000
CRZ1
M08541_2.00 		Saccharomyces cerevisiae
NNVMGCCHC
GDGGCKBNN		 Misc
DeBoer et al.(2011)
YNL027W_516 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
18885_YNL027W C2H2 ZF 562 584
18885_YNL027W C2H2 ZF 590 612
18885_YNL027W C2H2 ZF 618 648

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRZ1 Saccharomyces cerevisiae YNL027W D 0.827
LELG_02783 Lodderomyces elongisporus LELG_02783 I 0.756
SAKL0E07216g Lachancea kluyveri SAKL0E07216g I 0.780
Kwal_11460 Kluyveromyces waltii Kwal_11460 I 0.781
KLTH0G10802g Kluyveromyces thermotolerans KLTH0G10802g I 0.781
21534_YNL027W Saccharomyces bayanus 21534_YNL027W I 0.827
19232_YNL027W Saccharomyces paradoxus 19232_YNL027W I 0.827
Scas_Contig695.2 Saccharomyces castellii Scas_Contig695.2 I 0.800
ZYRO0A02288g Zygosaccharomyces rouxii ZYRO0A02288g I 0.804
ZBAI_05417 Zygosaccharomyces bailii ZBAI_05417 I 0.804
ZBAI_00257 Zygosaccharomyces bailii ZBAI_00257 I 0.804
TDEL_0G02330 Torulaspora delbrueckii TDEL_0G02330 I 0.816
TBLA_0B06050 Tetrapisispora blattae TBLA_0B06050 I 0.804
NDAI_0G00720 Naumovozyma dairenensis NDAI_0G00720 I 0.784
NCAS_0G03730 Naumovozyma castellii NCAS_0G03730 I 0.800
CPAG_02889 Candida parapsilosis CPAG_02889 I 0.756
LALA0_S03e01288g Lachancea lanzarotensis LALA0_S03e01288g I 0.804
Kpol_1003p50 Vanderwaltozyma polyspora Kpol_1003p50 I 0.784
KNAG_0H01930 Kazachstania naganishii KNAG_0H01930 I 0.791
KLTH0G10802g Lachancea thermotolerans KLTH0G10802g I 0.781
KLLA0_E08713g Kluyveromyces lactis KLLA0_E08713g I 0.764
KAFR_0H03240 Kazachstania africana KAFR_0H03240 I 0.772
GNLVRS01_PISO0F05527g Millerozyma farinosa GNLVRS01_PISO0F05527g I 0.756
GNLVRS01_PISO0E04118g Millerozyma farinosa GNLVRS01_PISO0E04118g I 0.756
Ecym_3341 Eremothecium cymbalariae Ecym_3341 I 0.784
CORT_0C02060 Candida orthopsilosis CORT_0C02060 I 0.756
CAGL0M06831g Candida glabrata CAGL0M06831g I 0.792
BN7_1577 Wickerhamomyces ciferrii BN7_1577 I 0.757
AGOS_ADL198W Ashbya gossypii AGOS_ADL198W I 0.784
AACERI_AaceriADL198W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL198W I 0.784