CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_041530
(
Penicillium marneffei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PMAA_041530
T146592_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_041530.t1
C2H2 ZF
9
33
FNCSWERCGKSFNRKSDLCRHYRIH
PMAA_041530.t1
C2H2 ZF
39
63
YHCTVPSCNKSFIQRSALTVHSRTH
PMAA_041530.t1
C2H2 ZF
69
93
HVCDHEDCRKAFSDSSSLARHRRIH
PMAA_041530.t1
C2H2 ZF
99
124
YICSEPACDRSFCRKTTLTKHQSRTH
PMAA_041530.t2
C2H2 ZF
9
33
FNCSWERCGKSFNRKSDLCRHYRIH
PMAA_041530.t2
C2H2 ZF
39
63
YHCTVPSCNKSFIQRSALTVHSRTH
PMAA_041530.t2
C2H2 ZF
69
93
HVCDHEDCRKAFSDSSSLARHRRIH
PMAA_041530.t2
C2H2 ZF
99
124
YICSEPACDRSFCRKTTLTKHQSRTH
PMAA_041530.t3
C2H2 ZF
9
33
FNCSWERCGKSFNRKSDLCRHYRIH
PMAA_041530.t3
C2H2 ZF
39
63
YHCTVPSCNKSFIQRSALTVHSRTH
PMAA_041530.t3
C2H2 ZF
69
93
HVCDHEDCRKAFSDSSSLARHRRIH
PMAA_041530.t3
C2H2 ZF
99
124
YICSEPACDRSFCRKTTLTKHQSRTH
Links
Other
C2H2 ZF
family TFs
Other
Penicillium marneffei
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PaG_04545
Pseudozyma aphidis
PaG_04545
N
PFL1_02638
Pseudozyma flocculosa
PFL1_02638
N
PHSY_006530
Pseudozyma hubeiensis
PHSY_006530
N
sr16425
Sporisorium reilianum
sr16425
N
UHOR_08277
Ustilago hordei
UHOR_08277
N
UM05801
Ustilago maydis
UM05801
N