CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACUA004653
(
Anopheles culicifacies
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ACUA004653
T147874_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.784
0.913
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.784
0.913
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.784
0.913
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.776
0.877
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.776
0.877
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACUA004653-PA
C2H2 ZF
292
314
FACPECGKVFNAHYNLTRHMPVH
ACUA004653-PA
C2H2 ZF
320
342
FICKICGKGFRQASTLCRHKIIH
ACUA004653-PA
C2H2 ZF
348
370
HKCQTCGKAFNRSSTLNTHTRIH
ACUA004653-PA
C2H2 ZF
376
398
YICEYCGKGFHQKGNYKNHKLTH
ACUA004653-PA
C2H2 ZF
404
426
YKCTICNKAFHQIYNLTFHMHTH
ACUA004653-PA
C2H2 ZF
432
455
FTCKICAKGFCRNFDLKKHMRKLH
Links
Other
C2H2 ZF
family TFs
Other
Anopheles culicifacies
TFs
167 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG90666
Fusarium solani
NechaG90666
N
0.000
SAPIO_CDS0751
Scedosporium apiospermum
SAPIO_CDS0751
N
0.000
VHEMI09332
Torrubiella hemipterigena
VHEMI09332
N
0.000
fgenesh1_pm.sca_18_chr2_1_0000070
Nectria haematococca
fgenesh1_pm.sca_18_chr2_1_0000070
N
0.000