CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AFAF005203
(
Anopheles farauti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
AFAF005203
T148584_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.784
0.913
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.784
0.913
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.784
0.913
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.776
0.877
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.776
0.877
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AFAF005203-PA
C2H2 ZF
366
388
FACPECGKVFNAHYNLTRHMPVH
AFAF005203-PA
C2H2 ZF
394
416
FICKICGKGFRQASTLCRHKIIH
AFAF005203-PA
C2H2 ZF
422
444
HKCQTCGKAFNRSSTLNTHTRIH
AFAF005203-PA
C2H2 ZF
450
472
YICEYCGKGFHQKGNYKNHKLTH
AFAF005203-PA
C2H2 ZF
478
500
YKCTICNKAFHQIYNLTFHMHTH
AFAF005203-PA
C2H2 ZF
506
529
FTCKICAKGFCRNFDLKKHMRKLH
Links
Other
C2H2 ZF
family TFs
Other
Anopheles farauti
TFs
167 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLI4
Homo sapiens
ENSG00000250571
D
0.000
ENSAMEG00000010458
Ailuropoda melanoleuca
ENSAMEG00000010458
I
0.000
GLI4
Canis familiaris
ENSCAFG00000029287
I
0.000
ENSCSAG00000009125
Chlorocebus sabaeus
ENSCSAG00000009125
I
0.000
GLI4
Dasypus novemcinctus
ENSDNOG00000001356
I
0.000
GLI4
Monodelphis domestica
ENSMODG00000011659
I
0.000
ENSMPUG00000008492
Mustela putorius furo
ENSMPUG00000008492
I
0.000
GLI4
Procavia capensis
ENSPCAG00000018803
I
0.000
ENSPPYG00000018931
Pongo abelii
ENSPPYG00000018931
I
0.000
GLI4
Pan troglodytes
ENSPTRG00000020650
I
0.000
GLI4
Pteropus vampyrus
ENSPVAG00000024242
I
0.000
ENSSSCG00000006960
Sus scrofa
ENSSSCG00000006960
I
0.000
GLI4
Tursiops truncatus
ENSTTRG00000021363
I
0.000