CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMEM014670
(
Anopheles merus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
AMEM014670
T149758_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
odd
M03667_2.00
Drosophila melanogaster
WGCTACCGGTAGCH
DGCTACCGGTAGCW
SELEX
Nitta et al.(2015)
odd_1
0.790
0.946
odd
M06467_2.00
Drosophila melanogaster
BTGCTACTGKD
HMCAGTAGCAV
B1H
Mathelier et al.(2014)
MA0454.1
0.790
0.946
odd
M06058_2.00
Drosophila melanogaster
BTGCTACTGKD
HMCAGTAGCAV
B1H
Zhu et al.(2011)
odd_NAR_FBgn0002985
0.790
0.946
odd
M06059_2.00
Drosophila melanogaster
GCTWCYGDW
WHCRGWAGC
B1H
Zhu et al.(2011)
odd_NBT_1.5_FBgn0002985
0.790
0.946
odd
M06060_2.00
Drosophila melanogaster
GCTACYGKD
HMCRGTAGC
B1H
Zhu et al.(2011)
odd_NBT_2.5_FBgn0002985
0.790
0.946
odd
M06061_2.00
Drosophila melanogaster
GCTACTGKD
HMCAGTAGC
B1H
Zhu et al.(2011)
odd_NBT_5_FBgn0002985
0.790
0.946
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMEM014670-PA
C2H2 ZF
110
132
FICKYCNRQFTKSYNLLIHERTH
AMEM014670-PA
C2H2 ZF
138
160
YSCDICGKAFRRQDHLRDHRYIH
AMEM014670-PA
C2H2 ZF
166
188
FKCSDCGKGFCQSRTLAVHKVTH
AMEM014670-PA
C2H2 ZF
194
216
HKCTICNRTFNQRANLKTHMQSH
Links
Other
C2H2 ZF
family TFs
Other
Anopheles merus
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla004185
Citrullus lanatus
Cla004185
N
Cucsa.089840
Cucumis sativus
Cucsa.089840
N