BGLB001048 (Biomphalaria glabrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 BGLB001048 T150647_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp143
M09010_2.00 		Mus musculus
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY		 Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A 		0.775 0.831
ZNF143
M02899_2.00 		Homo sapiens
YWCCCAYAATGCAYYG
CRRTGCATTRTGGGWR		 SELEX
Jolma et al.(2013)
ZNF143_1 		0.775 0.825
ZNF143
M07931_2.00 		Homo sapiens
RACTACAWYTCCCAG
CTGGGARWTGTAGTY		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford 		0.775 0.825
ZNF143
M08910_2.00 		Homo sapiens
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY		 Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A 		0.775 0.825
ZNF143
M09510_2.00 		Homo sapiens
NNYTCCCAKVAKSCH
DGSMTBMTGGGARNN		 Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600 		0.775 0.825
ZNF143
M10247_2.00 		Homo sapiens
NYYWCCCABMATGCAHYRCRNB
VNYGYRDTGCATKVTGGGWRRN		 Transfac
Matys et al.(2006)
V$STAF_01 		0.775 0.825
ZNF143
M10248_2.00 		Homo sapiens
MHBWCCCAKVRTBCMWHGMRV
BYKCDWKGVAYBMTGGGWVDK		 Transfac
Matys et al.(2006)
V$STAF_02 		0.775 0.825
ZNF143
M10249_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAF_Q4_01 		0.775 0.825
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB001048-PA C2H2 ZF 270 294
BGLB001048-PA C2H2 ZF 300 324
BGLB001048-PA C2H2 ZF 330 356
BGLB001048-PA C2H2 ZF 362 386
BGLB001048-PA C2H2 ZF 392 416
BGLB001048-PA C2H2 ZF 422 446
BGLB001048-PA C2H2 ZF 452 474

Links

Other C2H2 ZF family TFs
Other Biomphalaria glabrata TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
col-26 Neurospora crassa NCU07788 D
TRIREDRAFT_52368 Trichoderma reesei TRIREDRAFT_52368 I
VDBG_09402 Verticillium albo atrum VDBG_09402 I
NEUTE1DRAFT_59081 Neurospora tetrasperma NEUTE1DRAFT_59081 I
OCS_01944 Ophiocordyceps sinensis OCS_01944 I
OIDMADRAFT_45538 Oidiodendron maius OIDMADRAFT_45538 I
PFICI_10998 Pestalotiopsis fici PFICI_10998 I
PODANS_2_4060 Podospora anserina PODANS_2_4060 I
S40285_00097 Stachybotrys chlorohalonata S40285_00097 I
S40288_01569 Stachybotrys chartarum S40288_01569 I
SAPIO_CDS0393 Scedosporium apiospermum SAPIO_CDS0393 I
SBOR_6099 Sclerotinia borealis SBOR_6099 I
SEPMUDRAFT_146091 Sphaerulina musiva SEPMUDRAFT_146091 I
SMAC_08231 Sordaria macrospora SMAC_08231 I
THITE_2108095 Thielavia terrestris THITE_2108095 I
TRIATDRAFT_11573 Trichoderma atroviride TRIATDRAFT_11573 I
NechaG22260 Fusarium solani NechaG22260 I
TRIVIDRAFT_156582 Trichoderma virens TRIVIDRAFT_156582 I
UCREL1_10245 Eutypa lata UCREL1_10245 I
UV8b_5300 Ustilaginoidea virens UV8b_5300 I
V499_05963 Pseudogymnoascus pannorum V499_05963 I
VDAG_04640 Verticillium dahliae VDAG_04640 I
VDBG_09402 Verticillium alfalfae VDBG_09402 I
VHEMI08540 Torrubiella hemipterigena VHEMI08540 I
X797_001512 Metarhizium robertsii X797_001512 I
estExt_Genewise1.C_12176 Mycosphaerella fijiensis estExt_Genewise1.C_12176 I
estExt_Genewise1Plus.C_140234 Neurospora discreta estExt_Genewise1Plus.C_140234 I
gw1.14.468.1 Nectria haematococca gw1.14.468.1 I
estExt_Genewise1Plus.C_13371 Cryphonectria parasitica estExt_Genewise1Plus.C_13371 I
GGTG_06006 Gaeumannomyces graminis GGTG_06006 I
ACRE_067850 Acremonium chrysogenum ACRE_067850 I
BBA_09189 Beauveria bassiana BBA_09189 I
Bcin08g00160 Botrytis cinerea Bcin08g00160 I
BGHDH14_bgh05094 Blumeria graminis BGHDH14_bgh05094 I
CCM_09080 Cordyceps militaris CCM_09080 I
CFIO01_10198 Colletotrichum fioriniae CFIO01_10198 I
CH063_08735 Colletotrichum higginsianum CH063_08735 I
CHGG_07364 Chaetomium globosum CHGG_07364 I
CMQ_7699 Grosmannia clavigera CMQ_7699 I
CPUR_08028 Claviceps purpurea CPUR_08028 I
CTHT_0068480 Chaetomium thermophilum CTHT_0068480 I
DOTSEDRAFT_68376 Dothistroma septosporum DOTSEDRAFT_68376 I
EV44_g6268 Erysiphe necator EV44_g6268 I
F503_04220 Ophiostoma piceae uamh F503_04220 I
MYCTH_2301920 Myceliophthora thermophila MYCTH_2301920 I
GLRG_01145 Colletotrichum graminicola GLRG_01145 I
GMDG_01905 Pseudogymnoascus destructans GMDG_01905 I
MAC_05572 Metarhizium acridum MAC_05572 I
MAJ_06898 Metarhizium majus MAJ_06898 I
MAM_04875 Metarhizium album MAM_04875 I
MANI_011912 Metarhizium anisopliae MANI_011912 I
MAPG_04263 Magnaporthe poae MAPG_04263 I
MBM_09456 Marssonina brunnea MBM_09456 I
MBR_05015 Metarhizium brunneum MBR_05015 I
MGG_05343 Magnaporthe oryzae MGG_05343 I
MGU_01655 Metarhizium guizhouense MGU_01655 I
MYCFIDRAFT_127068 Pseudocercospora fijiensis MYCFIDRAFT_127068 I
S40288_10011 Stachybotrys chartarum S40288_10011 N