ACAC_0000515301 (Angiostrongylus cantonensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ACAC_0000515301 T151855_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.790 0.859
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.790 0.859
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.790 0.859
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACAC_0000515301-mRNA-1 C2H2 ZF 185 207
ACAC_0000515301-mRNA-1 C2H2 ZF 213 235
ACAC_0000515301-mRNA-1 C2H2 ZF 241 263
ACAC_0000515301-mRNA-1 C2H2 ZF 269 292

Links

Other C2H2 ZF family TFs
Other Angiostrongylus cantonensis TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC08G18550 Oryza punctata OPUNC08G18550 N
Pavir.Fb01913 Panicum virgatum Pavir.Fb01913 N
Pavir.Fa00462 Panicum virgatum Pavir.Fa00462 N
TRIUR3_01970 Triticum urartu TRIUR3_01970 N
Traes_7AS_3BAA88E9E Triticum aestivum Traes_7AS_3BAA88E9E N
Si014054m.g Setaria italica Si014054m.g N
Si001226m.g Setaria italica Si001226m.g N
Sb07g027350 Sorghum bicolor Sb07g027350 N
OS08G0515800 Oryza sativa OS08G0515800 N
ORUFI08G22870 Oryza rufipogon ORUFI08G22870 N
ORGLA08G0180600 Oryza glaberrima ORGLA08G0180600 N
BGIOSGA026683 Oryza indica BGIOSGA026683 N
OMERI02G02200 Oryza meridionalis OMERI02G02200 N
OLONG_027098 Oryza longistaminata OLONG_027098 N
OGLUM08G21650 Oryza glumaepatula OGLUM08G21650 N
OBART08G20380 Oryza barthii OBART08G20380 N
OB08G27280 Oryza brachyantha OB08G27280 N
MLOC_53939 Hordeum vulgare MLOC_53939 N
LPERR08G17220 Leersia perrieri LPERR08G17220 N
GRMZM2G113181 Zea mays GRMZM2G113181 N
F775_32365 Aegilops tauschii F775_32365 N
BRADI3G40280 Brachypodium distachyon BRADI3G40280 N