ASU_11043 (Ascaris suum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ASU_11043 T152329_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu
M03680_2.00 		Drosophila melanogaster
HCCRCCCACGCAH
DTGCGTGGGYGGD		 SELEX
Nitta et al.(2015)
klu_1 		0.774 0.793
klu
M03681_2.00 		Drosophila melanogaster
YMCGCCCMCGCAH
DTGCGKGGGCGKR		 SELEX
Nitta et al.(2015)
klu_2 		0.774 0.793
klu
M06114_2.00 		Drosophila melanogaster
MCACCCMCRCA
TGYGKGGGTGK		 B1H
Zhu et al.(2011)
klu_SANGER_10_FBgn0013469 		0.774 0.793
klu
M06115_2.00 		Drosophila melanogaster
NNNNMCACCCMCRCN
NGYGKGGGTGKNNNN		 B1H
Zhu et al.(2011)
klu_SOLEXA_5_FBgn0013469 		0.774 0.793
klu-1
M00637_2.00 		Caenorhabditis elegans
CDCCCMCV
BGKGGGHG		 PBM
Narasimhan et al.(2015)
pTH9355 		0.761 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ASU_11043 C2H2 ZF 422 445
ASU_11043 C2H2 ZF 462 484
ASU_11043 C2H2 ZF 490 512
ASU_11043 C2H2 ZF 518 540

Links

Other C2H2 ZF family TFs
Other Ascaris suum TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PHLGIDRAFT_131012 Phlebiopsis gigantea PHLGIDRAFT_131012 N
LACBIDRAFT_316204 Laccaria bicolor LACBIDRAFT_316204 N
M378DRAFT_9664 Amanita muscaria M378DRAFT_9664 N
M407DRAFT_15001 Tulasnella calospora M407DRAFT_15001 N
M413DRAFT_26586 Hebeloma cylindrosporum M413DRAFT_26586 N
M413DRAFT_26589 Hebeloma cylindrosporum M413DRAFT_26589 N
M422DRAFT_228165 Sphaerobolus stellatus M422DRAFT_228165 N
Moror_13102 Moniliophthora roreri Moror_13102 N
PAXRUDRAFT_13385 Paxillus rubicundulus PAXRUDRAFT_13385 N
K443DRAFT_600685 Laccaria amethystina K443DRAFT_600685 N
PIIN_05713 Piriformospora indica PIIN_05713 N
PILCRDRAFT_617380 Piloderma croceum PILCRDRAFT_617380 N
PISMIDRAFT_30225 Pisolithus microcarpus PISMIDRAFT_30225 N
PISMIDRAFT_681251 Pisolithus microcarpus PISMIDRAFT_681251 N
PLEOSDRAFT_1095325 Pleurotus ostreatus PLEOSDRAFT_1095325 N
SCHCODRAFT_258848 Schizophyllum commune SCHCODRAFT_258848 N
SCLCIDRAFT_136064 Scleroderma citrinum SCLCIDRAFT_136064 N
estExt_Genewise1.C_20016 Heterobasidion annosum estExt_Genewise1.C_20016 N
FOMPIDRAFT_1056345 Fomitopsis pinicola FOMPIDRAFT_1056345 N
AGABI2DRAFT_189528 Agaricus bisporus AGABI2DRAFT_189528 N
BN946_scf184843.g14 Trametes cinnabarina BN946_scf184843.g14 N
BOTBODRAFT_124915 Botryobasidium botryosum BOTBODRAFT_124915 N
CC1G_09613 Coprinopsis cinerea CC1G_09613 N
CERSUDRAFT_113178 Ceriporiopsis subvermispora CERSUDRAFT_113178 N
DACRYDRAFT_115574 Dacryopinax sp DACRYDRAFT_115574 N
E5Q_03184 Mixia osmundae E5Q_03184 N
FIBRA_07342 Fibroporia radiculosa FIBRA_07342 N
A1Q1_04075 Trichosporon asahii A1Q1_04075 N
GALMADRAFT_230738 Galerina marginata GALMADRAFT_230738 N
GLOINDRAFT_344558 Rhizophagus irregularis GLOINDRAFT_344558 N
GLOTRDRAFT_136609 Gloeophyllum trabeum GLOTRDRAFT_136609 N
GYMLUDRAFT_41472 Gymnopus luxurians GYMLUDRAFT_41472 N
HETIRDRAFT_471777 Heterobasidion irregulare HETIRDRAFT_471777 N
HYDPIDRAFT_43844 Hydnomerulius pinastri HYDPIDRAFT_43844 N
K437DRAFT_72830 Tilletiaria anomala K437DRAFT_72830 N