CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BXY_0112400
(
Bursaphelenchus xylophilus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
BXY_0112400
T152442_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pat-9
M00620_2.00
Caenorhabditis elegans
NDKTKTAAHN
NDTTAMAMHN
PBM
Narasimhan et al.(2015)
pTH10808
0.809
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BXY_0112400.1
C2H2 ZF
115
137
YPCSMCSSRFGSKMELEEHQNSH
BXY_0112400.1
C2H2 ZF
143
165
FECDVCQSRFNRRSTLWNHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Bursaphelenchus xylophilus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_18045
Wuchereria bancrofti
WUBG_18045
N
YQE_01103
Dendroctonus ponderosae
YQE_01103
N
YQE_01104
Dendroctonus ponderosae
YQE_01104
N
Ocbimv22030938m.g
Octopus bimaculoides
Ocbimv22030938m.g
N
ANCCAN_19498
Ancylostoma caninum
ANCCAN_19498
N
ANCDUO_14751
Ancylostoma duodenale
ANCDUO_14751
N
EVEC_0001275201
Enterobius vermicularis
EVEC_0001275201
N
L893_g11083
Steinernema glaseri
L893_g11083
N
PXEA_0002741601
Protopolystoma xenopodis
PXEA_0002741601
N
scaffold1374-EXSNAP2012.3
Pristionchus exspectatus
scaffold1374-EXSNAP2012.3
N
SVUK_0000264301
Strongylus vulgaris
SVUK_0000264301
N
TELCIR_07126
Teladorsagia circumcincta
TELCIR_07126
N