CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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csin106566
(
Clonorchis sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
csin106566
T152633_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
csin106566
C2H2 ZF
209
233
YQCIYPGCSKAYYKRSHLNEHSHLH
csin106566
C2H2 ZF
239
263
HLCGQPGCGARFTRADQLSRHRRAH
csin106566
C2H2 ZF
269
290
FFCKVCQRRFKRSDHLKVHLSR
Links
Other
C2H2 ZF
family TFs
Other
Clonorchis sinensis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA11G04050
Oryza nivara
ONIVA11G04050
N
Pavir.Bb00513
Panicum virgatum
Pavir.Bb00513
N
TRAES3BF135900030CFD_g
Triticum aestivum
TRAES3BF135900030CFD_g
N
Si028825m.g
Setaria italica
Si028825m.g
N
Si016246m.g
Setaria italica
Si016246m.g
N
OS11G0160700
Oryza sativa
OS11G0160700
N
ORUFI11G03870
Oryza rufipogon
ORUFI11G03870
N
ORGLA11G0036700
Oryza glaberrima
ORGLA11G0036700
N
OPUNC11G03660
Oryza punctata
OPUNC11G03660
N
BGIOSGA034453
Oryza indica
BGIOSGA034453
N
OMERI11G11300
Oryza meridionalis
OMERI11G11300
N
OMERI11G03590
Oryza meridionalis
OMERI11G03590
N
OLONG_001596
Oryza longistaminata
OLONG_001596
N
OLONG_001369
Oryza longistaminata
OLONG_001369
N
OGLUM11G03660
Oryza glumaepatula
OGLUM11G03660
N
OBART11G03940
Oryza barthii
OBART11G03940
N
OB11G20720
Oryza brachyantha
OB11G20720
N
LPERR11G10810
Leersia perrieri
LPERR11G10810
N