DME_0000421901 (Dracunculus medinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 DME_0000421901 T153137_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.765 0.798
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.765 0.798
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.765 0.798
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.765 0.798
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
DME_0000421901-mRNA-1 C2H2 ZF 87 109
DME_0000421901-mRNA-1 C2H2 ZF 118 140
DME_0000421901-mRNA-1 C2H2 ZF 144 166
DME_0000421901-mRNA-1 C2H2 ZF 172 194
DME_0000421901-mRNA-1 C2H2 ZF 200 221

Links

Other C2H2 ZF family TFs
Other Dracunculus medinensis TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CIMG_05222 Coccidioides immitis CIMG_05222 N
MCYG_04260 Microsporum canis MCYG_04260 N
ARB_04772 Arthroderma benhamiae ARB_04772 N
BDDG_00804 Blastomyces dermatitidis BDDG_00804 N
CPC735_064900 Coccidioides posadasii CPC735_064900 N
H102_05875 Trichophyton rubrum H102_05875 N
H105_05916 Trichophyton soudanense H105_05916 N
HCBG_01014 Histoplasma capsulatum HCBG_01014 N
MCYG_04260 Arthroderma otae MCYG_04260 N
MGYG_02348 Microsporum gypseum MGYG_02348 N
PAAG_06200 Paracoccidioides sp lutzii PAAG_06200 N
PABG_05221 Paracoccidioides brasiliensis PABG_05221 N
TEQG_08051 Trichophyton equinum TEQG_08051 N
TESG_01289 Trichophyton tonsurans TESG_01289 N
TRV_06373 Trichophyton verrucosum TRV_06373 N
UREG_06397 Uncinocarpus reesii UREG_06397 N