CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_000578000
(
Globodera pallida
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
GPLIN_000578000
T153568_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000578000
C2H2 ZF
140
162
YKCRFCGLTFNYMTTLKAHERVH
GPLIN_000578000
C2H2 ZF
168
190
YLCNKCGESFHYMCELEYHAKTH
Links
Other
C2H2 ZF
family TFs
Other
Globodera pallida
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g7854
Steinernema carpocapsae
L596_g7854
N
0.788
L892_g11527
Steinernema scapterisci
L892_g11527
N
0.788
L898_g34596
Steinernema monticolum
L898_g34596
N
0.769