CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI00513900
(
Haemonchus contortus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HCOI00513900
T153807_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI00513900.t1
C2H2 ZF
226
250
HRCLWENCYRQFENKGDLRKHVRHH
HCOI00513900.t1
C2H2 ZF
256
277
CACPFCGRFFSRPDKLYEHLRK
HCOI00513900.t1
C2H2 ZF
289
311
HLCLLCQRRFGDERSLVNHVRRH
HCOI00513900.t1
C2H2 ZF
316
338
QCPTCGLAVQLPSDLHRHILVKH
HCOI00513900.t1
C2H2 ZF
345
367
LTCPDCEKSFYCTTDLIRHSAVH
HCOI00513900.t1
C2H2 ZF
373
394
KCPQCDERFRWKKQLDKHMITH
HCOI00513900.t1
C2H2 ZF
403
426
YLCHICDSTYATGHGLTRHLSRKH
Links
Other
C2H2 ZF
family TFs
Other
Haemonchus contortus
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_01163
Capronia coronata
A1O1_01163
N
A1O3_08744
Capronia epimyces
A1O3_08744
N
A1O5_00465
Cladophialophora psammophila
A1O5_00465
N
G647_01390
Cladophialophora carrionii
G647_01390
N
HMPREF1120_00246
Exophiala dermatitidis
HMPREF1120_00246
N
PV04_00642
Capronia semiimmersa
PV04_00642
N
PV05_01911
Exophiala xenobiotica
PV05_01911
N
PV06_06126
Exophiala oligosperma
PV06_06126
N
PV07_05916
Cladophialophora immunda
PV07_05916
N
PV08_04836
Exophiala spinifera
PV08_04836
N
PV10_02394
Exophiala mesophila
PV10_02394
N
PV11_10133
Exophiala sideris
PV11_10133
N
Z517_07107
Fonsecaea pedrosoi
Z517_07107
N
Z518_02214
Rhinocladiella mackenziei
Z518_02214
N
Z519_00472
Cladophialophora bantiana
Z519_00472
N