CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HmN_000054200
(
Hymenolepis microstoma
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HmN_000054200
T153977_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HmN_000054200
C2H2 ZF
198
220
YLCSHCGRGFTKAYNRTIHERTH
HmN_000054200
C2H2 ZF
226
248
FECVVCSRRFRRKDHLRDHSYTH
HmN_000054200
C2H2 ZF
254
277
FSCTICNRGFCQARSLENHKKNNH
Links
Other
C2H2 ZF
family TFs
Other
Hymenolepis microstoma
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
danr
Drosophila melanogaster
FBgn0039283
D
danr
Drosophila pseudoobscura
FBgn0072483
I
GF17893
Drosophila ananassae
FBgn0094911
I
GG11367
Drosophila erecta
FBgn0103667
I
GH18050
Drosophila grimshawi
FBgn0125518
I
GI23730
Drosophila mojavensis
FBgn0146455
I
GL21906
Drosophila persimilis
FBgn0159499
I
GD21179
Drosophila simulans
FBgn0192630
I
GJ23601
Drosophila virilis
FBgn0210698
I
GK13890
Drosophila willistoni
FBgn0215897
I
GE23564
Drosophila yakuba
FBgn0240740
I