CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
HmN_000083600
(
Hymenolepis microstoma
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HmN_000083600
T153980_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HmN_000083600
C2H2 ZF
139
162
YKCPSCPALYSNANAFTKHMREKH
HmN_000083600
C2H2 ZF
167
190
YTCRQCDEFFETLSQLFLHARRSH
HmN_000083600
C2H2 ZF
233
255
FVCDVCNKRFAQKANMKTHRNRH
HmN_000083600
C2H2 ZF
262
286
FRCETCNKAFSSYDIYLAHLRTREH
HmN_000083600
C2H2 ZF
302
323
LECLGCSLSFDSIYNLNKHTRG
HmN_000083600
C2H2 ZF
362
386
ISCPVCGERGFPGFNQLNHHITRAH
HmN_000083600
C2H2 ZF
394
417
HVCRYCESTFEQKKDLDVHIRSMH
Links
Other
C2H2 ZF
family TFs
Other
Hymenolepis microstoma
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HNAJ_0001108601
Hymenolepis nana
HNAJ_0001108601
N
0.807
TTAC_0000117301
Hydatigera taeniaeformis
TTAC_0000117301
N
0.796
TsM_000623000
Taenia solium
TsM_000623000
N
0.803
T265_06698
Opisthorchis viverrini
T265_06698
N
0.763
SSLN_0000095401
Schistocephalus solidus
SSLN_0000095401
N
0.796
SROB_0001916001
Schistosoma rodhaini
SROB_0001916001
N
0.796
SMRZ_0000566901
Schistosoma margrebowiei
SMRZ_0000566901
N
0.789
SCUD_0000712901
Schistosoma curassoni
SCUD_0000712901
N
0.796
MCOS_0000608501
Mesocestoides corti
MCOS_0000608501
N
0.796
Smp_015840
Schistosoma mansoni
Smp_015840
N
0.796
HDID_0000119801
Hymenolepis diminuta
HDID_0000119801
N
0.824
EmuJ_000596600
Echinococcus multilocularis
EmuJ_000596600
N
0.803
ECANG7_00876
Echinococcus canadensis
ECANG7_00876
N
0.803
DILT_0001782101
Diphyllobothrium latum
DILT_0001782101
N
0.796
D915_08997
Fasciola hepatica
D915_08997
N
0.797
csin111833
Clonorchis sinensis
csin111833
N
0.763
A_02757
Schistosoma haematobium
A_02757
N
0.796
Sjc_0034430
Schistosoma japonicum
Sjc_0034430
N
0.796