CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HmN_000235100
(
Hymenolepis microstoma
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HmN_000235100
T154000_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HmN_000235100
C2H2 ZF
1355
1378
HPCPECSREFRSKQALNHHIQMRH
HmN_000235100
C2H2 ZF
1389
1411
TCEQCGITYPKRSALKYHIARMH
HmN_000235100
C2H2 ZF
1417
1440
HQCPVCQQRFRIETYLRRHMKETH
HmN_000235100
C2H2 ZF
1472
1495
FQCTECSVSFKSKTAMRRHVRVEH
HmN_000235100
C2H2 ZF
1527
1549
FKCMYCDKQFTKSVYYNEHLRIH
HmN_000235100
C2H2 ZF
1555
1577
FECHICGRRFNKKSNLNVHLKFH
Links
Other
C2H2 ZF
family TFs
Other
Hymenolepis microstoma
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Kpol_1018p105
Vanderwaltozyma polyspora
Kpol_1018p105
I
Kpol_1045p30
Vanderwaltozyma polyspora
Kpol_1045p30
I
TBLA_0D00490
Tetrapisispora blattae
TBLA_0D00490
I
TDEL_0C02690
Torulaspora delbrueckii
TDEL_0C02690
I
6438_YER111C
Saccharomyces mikatae
6438_YER111C
I
6569_YER111C
Saccharomyces paradoxus
6569_YER111C
I
NCAS_0A14500
Naumovozyma castellii
NCAS_0A14500
N
Scas_Contig510.2
Saccharomyces castellii
Scas_Contig510.2
N