CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HNAJ_0001239901
(
Hymenolepis nana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HNAJ_0001239901
T154178_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HNAJ_0001239901-mRNA-1
C2H2 ZF
92
115
YRCSECTQIFHWHGDLAEHLREAH
HNAJ_0001239901-mRNA-1
C2H2 ZF
152
174
FGCLYCKYEAKYESELKRHMRLH
HNAJ_0001239901-mRNA-1
C2H2 ZF
180
203
FKCDFCEYKSSWKGDLKRHIEAHH
Links
Other
C2H2 ZF
family TFs
Other
Hymenolepis nana
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPRG_04580
Saprolegnia parasitica
SPRG_04580
N
F443_09935
Phytophthora parasitica
F443_09935
N
fgenesh_scip_prom.28083.10566
Phytophthora lateralis
fgenesh_scip_prom.28083.10566
N
fgenesh_scip_prom.46568.523
Phytophthora kernoviae
fgenesh_scip_prom.46568.523
N
maker-pag1_scaffold_20-fgenesh-gene-0.5
Pythium aphanidermatum
maker-pag1_scaffold_20-fgenesh-gene-0.5
N
maker-par_contig_163-fgenesh-gene-0.4
Pythium arrhenomanes
maker-par_contig_163-fgenesh-gene-0.4
N
maker-pir_contig_257-fgenesh-gene-0.6
Pythium irregulare
maker-pir_contig_257-fgenesh-gene-0.6
N
maker-pve_contig_229-fgenesh-gene-0.8
Pythium vexans
maker-pve_contig_229-fgenesh-gene-0.8
N
Phyra79798
Phytophthora ramorum
Phyra79798
N
Physo129090
Phytophthora sojae
Physo129090
N
PITG_20209
Phytophthora infestans
PITG_20209
N
PYU1_G008658
Pythium ultimum
PYU1_G008658
N