nAv.1.0.1.g00595 (Acanthocheilonema viteae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 nAv.1.0.1.g00595 T155002_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.756 0.841
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.756 0.841
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.756 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nAv.1.0.1.t00595-RA C2H2 ZF 47 69
nAv.1.0.1.t00595-RA C2H2 ZF 75 97
nAv.1.0.1.t00595-RA C2H2 ZF 103 125
nAv.1.0.1.t00595-RA C2H2 ZF 131 153
nAv.1.0.1.t00595-RA C2H2 ZF 159 181
nAv.1.0.1.t00595-RA C2H2 ZF 187 210

Links

Other C2H2 ZF family TFs
Other Acanthocheilonema viteae TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
erm Drosophila melanogaster FBgn0031375 D 0.756
WBGene00240874 Onchocerca volvulus WBGene00240874 I 0.815
SMU15029105 Schmidtea mediterranea SMU15029105 I 0.764
LDEC014963 Leptinotarsa decemlineata LDEC014963 I 0.762
LCUP016153 Lucilia cuprina LCUP016153 I 0.756
Sakowv30000725m.g Saccoglossus kowalevskii Sakowv30000725m.g I 0.756
Ocbimv22019950m.g Octopus bimaculoides Ocbimv22019950m.g I 0.760
e_gw.37.272.1 Branchiostoma floridae e_gw.37.272.1 I 0.756
Cflo_12390--XP_396560.3_APIME Camponotus floridanus Cflo_12390--XP_396560.3_APIME I 0.758
YQE_09264 Dendroctonus ponderosae YQE_09264 I 0.760
AATE010730 Anopheles atroparvus AATE010730 I 0.766
TC004673 Tribolium castaneum TC004673 I 0.760
SPU_027491 Strongylocentrotus purpuratus SPU_027491 I 0.764
SPU_019089 Strongylocentrotus purpuratus SPU_019089 I 0.764
SMAR013549 Strigamia maritima SMAR013549 I 0.756
SINV23141 Solenopsis invicta SINV23141 I 0.760
PHUM527180 Pediculus humanus PHUM527180 I 0.756
NV15785 Nasonia vitripennis NV15785 I 0.756
LotgiG68213 Lottia gigantea LotgiG68213 I 0.756
ALUE_0000460501 Ascaris lumbricoides ALUE_0000460501 I 0.800
SPER_0003711101 Spirometra erinaceieuropaei SPER_0003711101 I 0.765
L898_g8627 Steinernema monticolum L898_g8627 I 0.784
L893_g21036 Steinernema glaseri L893_g21036 I 0.784
L889_g28370 Steinernema feltiae L889_g28370 I 0.784
L596_g18433 Steinernema carpocapsae L596_g18433 I 0.784
BXY_0772300 Bursaphelenchus xylophilus BXY_0772300 I 0.760
ASU_09688 Ascaris suum ASU_09688 I 0.800
ASIM_0001261601 Anisakis simplex ASIM_0001261601 I 0.784
AAEL007233 Aedes aegypti AAEL007233 I 0.758
MDOA009701 Musca domestica MDOA009701 I 0.756
BGLB000775 Biomphalaria glabrata BGLB000775 I 0.758
ASIS016906 Anopheles sinensis ASIS016906 I 0.766
AMEM004474 Anopheles merus AMEM004474 I 0.766
AMEC007368 Anopheles melas AMEC007368 I 0.766
AFUN003340 Anopheles funestus AFUN003340 I 0.766
AFAF005203 Anopheles farauti AFAF005203 I 0.766
ACUA004653 Anopheles culicifacies ACUA004653 I 0.766
DAPPUDRAFT_40822 Daphnia pulex DAPPUDRAFT_40822 I 0.756
fezf1 Takifugu rubripes ENSTRUG00000016410 I 0.756
fezf1 Tetraodon nigroviridis ENSTNIG00000010414 I 0.756
ENSPFOG00000017410 Poecilia formosa ENSPFOG00000017410 I 0.756
fezf1 Oryzias latipes ENSORLG00000019987 I 0.756
ENSONIG00000012688 Oreochromis niloticus ENSONIG00000012688 I 0.756
ENSGMOG00000010906 Gadus morhua ENSGMOG00000010906 I 0.756
fezf1 Gasterosteus aculeatus ENSGACG00000008652 I 0.756
fezf1 Danio rerio ENSDARG00000010270 I 0.762
L798_10183 Zootermopsis nevadensis L798_10183 I 0.766
CPIJ012530 Culex quinquefasciatus CPIJ012530 I 0.766
CapteG181040 Capitella teleta CapteG181040 I 0.758
BGIBMGA004593 Bombyx mori BGIBMGA004593 I 0.756
AGAP009286 Anopheles gambiae AGAP009286 I 0.766
ACYPI004681 Acyrthosiphon pisum ACYPI004681 I 0.758
ACEP22169 Atta cephalotes ACEP22169 I 0.760
CpipJ_CPIJ012530 Culex pipiens CpipJ_CPIJ012530 I 0.766
GA16381 Drosophila pseudoobscura FBgn0076396 I 0.758
LOAG_04822 Loa loa LOAG_04822 I 0.823
ISCW016275 Ixodes scapularis ISCW016275 I 0.756
HelroG63207 Helobdella robusta HelroG63207 I 0.756
GB40147 Apis mellifera GB40147 I 0.758
GE15291 Drosophila yakuba FBgn0232877 I 0.756
GK24816 Drosophila willistoni FBgn0226775 I 0.758
GJ19651 Drosophila virilis FBgn0206793 I 0.756
GD22883 Drosophila simulans FBgn0194277 I 0.756
GM16579 Drosophila sechellia FBgn0171492 I 0.756
GL18461 Drosophila persimilis FBgn0156062 I 0.758
GI13715 Drosophila mojavensis FBgn0136470 I 0.756
GH25019 Drosophila grimshawi FBgn0132474 I 0.758
GH10862 Drosophila grimshawi FBgn0118343 I 0.758
GG24566 Drosophila erecta FBgn0116698 I 0.756
GF19706 Drosophila ananassae FBgn0096713 I 0.758
ENSXMAG00000002453 Xiphophorus maculatus ENSXMAG00000002453 I 0.756
BTMF_0001477001 Brugia timori BTMF_0001477001 N 0.825
Bm6442 Brugia malayi Bm6442 N 0.825
DME_0000378901 Dracunculus medinensis DME_0000378901 N 0.770
EEL_0001059101 Elaeophora elaphi EEL_0001059101 N 0.825
nOo.2.0.1.g00928 Onchocerca ochengi nOo.2.0.1.g00928 N 0.813
TCLT_0000483901 Thelazia callipaeda TCLT_0000483901 N 0.817