CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0000822401
(
Nippostrongylus brasiliensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NBR_0000822401
T155083_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0000822401-mRNA-1
C2H2 ZF
18
40
FSCNVCGKAFADKSNLRAHVQTH
NBR_0000822401-mRNA-1
C2H2 ZF
46
67
HQCSRCLKRFALKSYLSKHEES
Links
Other
C2H2 ZF
family TFs
Other
Nippostrongylus brasiliensis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OSTLU_17981
Ostreococcus lucimarinus
OSTLU_17981
N
EuGene.0000020196
Micromonas pusilla
EuGene.0000020196
N
fgenesh4_pg.C_scaffold_60000103
Volvox carteri
fgenesh4_pg.C_scaffold_60000103
N
IGS.gm_4_00240
Chlorella NC64A
IGS.gm_4_00240
N
EuGene.0100010448
Micromonas sp RCC299
EuGene.0100010448
N
GG.C169_S04_00468
Chlorella vulgaris
GG.C169_S04_00468
N