CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nOo.2.0.1.g10808
(
Onchocerca ochengi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nOo.2.0.1.g10808
T155426_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nOo.2.0.1.t10808-RA
C2H2 ZF
1
20
MVCGKAFSQSSNLITHSRKH
nOo.2.0.1.t10808-RA
C2H2 ZF
26
49
FSCDICGRTFQRKVDRRRHRESHH
Links
Other
C2H2 ZF
family TFs
Other
Onchocerca ochengi
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10008515m.g
Citrus clementina
Ciclev10008515m.g
I
0.000
gene08757-v1.0-hybrid
Fragaria vesca
gene08757-v1.0-hybrid
I
0.000
orange1.1g015739m.g
Citrus sinensis
orange1.1g015739m.g
I
0.000
Thhalv10004701m.g
Eutrema salsugineum
Thhalv10004701m.g
I
0.000
BZIP9
Arabidopsis thaliana
AT5G24800
N
0.000
Bo2g159200
Brassica oleracea
Bo2g159200
N
0.000
Bra009793
Brassica rapa
Bra009793
N
0.000
Bra020471
Brassica rapa
Bra020471
N
0.000
ATBZIP9
Arabidopsis lyrata
scaffold_602583.1
N
0.000
Bostr.5763s0039
Boechera stricta
Bostr.5763s0039
N
0.000
Cagra.0622s0012
Capsella grandiflora
Cagra.0622s0012
N
0.000
evm.TU.supercontig_244.3
Carica papaya
evm.TU.supercontig_244.3
N
0.000