CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g21894
(
Romanomermis culicivorax
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nRc.2.0.1.g21894
T155475_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t21894-RA
C2H2 ZF
192
214
FRCHICSKAFADKSNLRAHVQTH
nRc.2.0.1.t21894-RA
C2H2 ZF
220
241
FICHRCGKSFALKSYLSKHTES
Links
Other
C2H2 ZF
family TFs
Other
Romanomermis culicivorax
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOAG_11163
Loa loa
LOAG_11163
N
0.769
ANCCEY_14138
Ancylostoma ceylanicum
ANCCEY_14138
N
0.763
NBR_0000822401
Nippostrongylus brasiliensis
NBR_0000822401
N
0.763
SBAD_0000793201
Soboliphyme baturini
SBAD_0000793201
N
0.761
TELCIR_03121
Teladorsagia circumcincta
TELCIR_03121
N
0.763
TTRE_0000249901
Trichuris trichiura
TTRE_0000249901
N
0.761